Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01609 ATGAGGAAAATCACCGGAAATGAAAGGGGCATCAGTATCCTTTGCAGGATAAACATCGGCTTGATACTGTCAGCTATGATAATGGTTCTTTCAGCCTTAGTAGAAGTTAAGAGACTTAGAATGCTTGAGCATGAAGTCTCGAGAACACGGGAAACAGAGCTGAACACTATGAGTGTGTACTGGTTGATACCACAAAACCTGATCGCTGGCGTTGGGGACGCGTTTTCTATGGTTGGTATGCAAGAGTATTTCTATGATGAAGTTCCTGACTCAATGAGAAGCTTGGGATTGGCATTGTATTTTAGTGTGTTTGGAATTGGAAGCTTCTTAAGCACTTTTTTAATCATTGCGGTGGACAATGTAACCGCGAAGAGTGGCAAAAGTTGGATCGGGAAGGATATAAACTCGAGCCGTTTGGATAAGTTTTATTGGTTGTTGGCAGTTATAAGTTTTTTGAATGTGCTGGTCTTTCTCTTCATAGAAAAGAGGTACATTTATAAGAAAGTACAGATGAAAGCTATGGAAACTAATGGTTATAAGAGTGATGATGATGACAGCTTCATGGAGGATACTAAGGTCTAG 582 0.4021 MRKITGNERGISILCRINIGLILSAMIMVLSALVEVKRLRMLEHEVSRTRETELNTMSVYWLIPQNLIAGVGDAFSMVGMQEYFYDEVPDSMRSLGLALYFSVFGIGSFLSTFLIIAVDNVTAKSGKSWIGKDINSSRLDKFYWLLAVISFLNVLVFLFIEKRYIYKKVQMKAMETNGYKSDDDDSFMEDTKV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01609 193 SUPERFAMILY MFS general substrate transporter 19 164 IPR036259 -
Vifa2g01609 193 Gene3D MFS general substrate transporter like domains 1 174 IPR036259 -
Vifa2g01609 193 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 166 - -
Vifa2g01609 193 Pfam POT family 3 125 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01609 Vifa-Chr2 428446995 428447576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01609 1 170 Organic Solute Cotransporters AT3G53960 52.326 1.23e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01609 K26562 - gmx:102660397 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01609 2 428446995 428447576 Vifa2g01609 2 428446995 428447576 ECH