Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01599 ATGGAGAACGCCGACCCTTGTAGAGATTTCGTCAAAGATGTTAAGCGCATAATCATCAAGGTTGGAACTGCTGTTGTTACTCGACAAGATGGAAGATTAGCAGTTGGAAAATTAGGGGCACTTTGTGAGCAGATTAAGGAGCTGAATATTCTAGGTTATGAAGTTATTTTGGTTTCATCAGGTGCTGTTGGCTTAGGTCGACAAAGGCTTAGATATAGAAAATTGATTCATAGTAGCTTTGCTGATCTTCAGAAGCCACAAGTTGAACTTGATGGCAAGGCTTGTGCTGCTGTTGGACAAAGCAGTCTTATGGCTACTTATGATGATTTGTTTAGTCAGCTGGATGTGACGTCTGCGCAGCTTCTTGTTACCGACAATGATTTTAGAGACAAAGATTTTAGAAAGCAACTTTCTGAAACTGTGAAATCACTTCTATCGTTGAAAGTTATTCCAATATTCAACGAGAACGATGCAGTTAGTACTAGGAAAGCTCCATACGAGGATTCTTCTGGCATATTTTGGGACAACGACAGTTTATCAGCTTTGTTGGCCTTGGAATTAAAAGCAGATCTTCTTATTTTGTTGAGTGATGTAGATGGTCTTTATAATGGCCCTCCAAGTGATCCTCAGTCAAAGCTCATTCACACATACATTAAGGAAAAGCATCAAAACGAAATTACTTTTGGAGACAAGTCTAGAGTGGGAAGAGGTGGGATGACGGCGAAAGTAAAAGCTTCTGTTCATGCAGCTGATGCCGGCATTCCTGTTATCATTACCAGTGGTAACACAGCTGAAAATCTCACTAAAATCCTCCAAGGACAGCGTATCGGCACCCTCTTCCATAAAGATGCGGCTAAGTGGGTCCCATTAAAAGAGGTTGATGTACGTGAAATGGCAGTTGCAGCTAGGGACTGTTCCAGACGGCTTCAGGTCGCATCTTCAGAAGAAAGGAAACAAATTTTGCTAAGTATAGCAGATGCCTTGGAATCGCATCAGAAAGAGATCAGGATCGAAAACGAAGCTGATGTTGCAGCAGCTCAAGAAGCTGGATATGAAAAATCATTAGTTGCTAGGCTGGCTTTAAAGAACGAGAAGGCAAGACAGTTCACGTAA 1113 0.4169 MENADPCRDFVKDVKRIIIKVGTAVVTRQDGRLAVGKLGALCEQIKELNILGYEVILVSSGAVGLGRQRLRYRKLIHSSFADLQKPQVELDGKACAAVGQSSLMATYDDLFSQLDVTSAQLLVTDNDFRDKDFRKQLSETVKSLLSLKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLILLSDVDGLYNGPPSDPQSKLIHTYIKEKHQNEITFGDKSRVGRGGMTAKVKASVHAADAGIPVIITSGNTAENLTKILQGQRIGTLFHKDAAKWVPLKEVDVREMAVAARDCSRRLQVASSEERKQILLSIADALESHQKEIRIENEADVAAAQEAGYEKSLVARLALKNEKARQFT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01599 370 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Vifa2g01599 370 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 1 368 - -
Vifa2g01599 370 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 286 370 IPR016162 GO:0016491
Vifa2g01599 370 FunFam Delta-1-pyrroline-5-carboxylate synthase 4 287 - -
Vifa2g01599 370 SUPERFAMILY ALDH-like 294 364 IPR016161 GO:0016491
Vifa2g01599 370 NCBIfam glutamate 5-kinase 15 286 IPR005715 GO:0005737|GO:0006561
Vifa2g01599 370 Gene3D - 5 285 IPR036393 -
Vifa2g01599 370 Hamap Glutamate 5-kinase [proB]. 15 284 IPR005715 GO:0005737|GO:0006561
Vifa2g01599 370 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Vifa2g01599 370 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Vifa2g01599 370 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Vifa2g01599 370 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Vifa2g01599 370 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Vifa2g01599 370 Pfam Amino acid kinase family 15 260 IPR001048 -
Vifa2g01599 370 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01599 Vifa-Chr2 427120026 427121881 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01599 K12657 - gmx:548058 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01599 2 427120026 427121881 Vifa2g01599 2 427120026 427121881 ECH