Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01592 ATGAACAAGCAAAGTATGTTGGACGTTGTTTTACATGATATACTTCATATGGTCACACCCTCGCGAGAAGATTGGGAGATACGGCTTGCAATTATAAATGATTTGCGAAGCACTGTTGAATCTGTGGAAAGCCTGAGAGGAGCAACTGTTGAACCTTTTGGGTCATATGTATCTAATCTCTTCACGCGATGGGGTGACTTGGATATTTCAATTGAGATATTAAATGGCACCCATATTGCATCTGCTGGGAAAAAACAAAAACAAACGTTGCTGGTAAATTTCCTAAAAGTTTTGAGAGTGAAAGGTGGATGCATGCACTTTCAGTTCATCCCTCATGCAAGAGTTCCCATTTTAAAATTCAAAAGCGTACGACAAGGCATATCTTGCGATGTTTCGATCAATAACCTTCCGGGCCTGATGAAATCCAAATTTTTGCTTTGGATCAACAAGATAGATTCCCGCTTTCATGATTTGGTTTTAGTGGTTAAGCAATGGGCCAACGCACATAAAATCAATAACTCGAAGACTGGATCTTTCAACTCCTTTACTCTCAGTTTACTTGTAATCTTTCACTTTCAGACATGTGTTCCTGCAATTTTTCCACCGCTGAAAGATATATATCCTACCAATATGGTTGATGAGCTAAGAGGTGTTAGAGTTGATGCCGAGAATCTTATTGCAGAAACCTGTAATGCTAACATAGACAGCTTCATATTAAATAAGTTGAGGCGAATCAACAGAACATCTTTACCTGAACTTTTCATTGATTTCCTAAGAAAGTTTGCTCAGATAGATTCATGGGCCGCAGAGTATGGAATTTGCACTTATACGGGACAACGGGAACAGATAGAAAACAACATGAGATGGTTGCCCAAGACTAGTGCAATATACGTTGAGGATCCTTTTGAGCAGCCAGAAAATTCAGCAAGATCAGTGAGTGCAGGACAGCTGAAAAAGATAGGCGAAGCATTTCAAACGACGTACAACTTACTTATATCAAACAATCAGAACCAAATCTCTCTCCTGACCCAATTAGTACCACCGCATGTGTTCAGCCTTATTGTCCATAGGGGAGTGCTCCCACTCCCACATTCAAAACACCTTGTTCAAAATGGCAGGCAGGGAGTCAATTCCAATGGTTTGACTTCAAAGCGAGGAGCCAATTCCAACGGTTCGACTTCAAAGCAAGGGGCCAATTCCAACGGTTCGACTTCAAAGCAAAGGGCCAATCCCAACGGTTCGACTTCAAAGCAAAGAGCCAATTCTAACGCTTCGACTTCAAAGCAAGGAGCAAGCTCCAATGCCTCTACTTCAAAGCAAGGAGTAAGCTCCAATGCCTCTACTTCAAAGCAAGGAGCAAGCTCCAATGGTTCGACTCCAAAGCAAGGAGCAAGCTCCAATGGTTCGACTCCAAAGCAAGGAGCAACCTCCGATGGTTCGACTTCAATTATACCTACAAAAGGTCGTCAAGGTCCGCAGCAGCAGGCGTGGAGGCCAAAGGCCCATACCCAAGCATAG 1518 0.4269 MNKQSMLDVVLHDILHMVTPSREDWEIRLAIINDLRSTVESVESLRGATVEPFGSYVSNLFTRWGDLDISIEILNGTHIASAGKKQKQTLLVNFLKVLRVKGGCMHFQFIPHARVPILKFKSVRQGISCDVSINNLPGLMKSKFLLWINKIDSRFHDLVLVVKQWANAHKINNSKTGSFNSFTLSLLVIFHFQTCVPAIFPPLKDIYPTNMVDELRGVRVDAENLIAETCNANIDSFILNKLRRINRTSLPELFIDFLRKFAQIDSWAAEYGICTYTGQREQIENNMRWLPKTSAIYVEDPFEQPENSARSVSAGQLKKIGEAFQTTYNLLISNNQNQISLLTQLVPPHVFSLIVHRGVLPLPHSKHLVQNGRQGVNSNGLTSKRGANSNGSTSKQGANSNGSTSKQRANPNGSTSKQRANSNASTSKQGASSNASTSKQGVSSNASTSKQGASSNGSTPKQGASSNGSTPKQGATSDGSTSIIPTKGRQGPQQQAWRPKAHTQA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01592 505 Gene3D Beta Polymerase, domain 2 30 151 IPR043519 -
Vifa2g01592 505 CDD NT_PAP_TUTase 27 148 - -
Vifa2g01592 505 Gene3D - 152 329 - -
Vifa2g01592 505 PANTHER POLY A POLYMERASE CID PAP -RELATED 5 465 - -
Vifa2g01592 505 MobiDBLite consensus disorder prediction 370 505 - -
Vifa2g01592 505 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 337 - -
Vifa2g01592 505 MobiDBLite consensus disorder prediction 369 505 - -
Vifa2g01592 505 SUPERFAMILY Nucleotidyltransferase 7 147 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01592 - - vum:124831893 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01592 2 426551580 426556496 Vifa2g01592 2 426551580 426556496 ECH