Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01589 ATGGCTCTTTTTCTCAACGCCTCCTTATCTTCCACTTCCAAAACCCATCACCGTCTTTCCTTTTCAACCACCTCCACAACTCCTCCTCCGTTTCTGAGAACCAATCCGAAGCAAACTCAACAACCTCCTCCAAAACTCACATTATCATTCGTCGAATCCGTGTCTAGTGCTACCCTCGTCGCTCTTCTATCTGCTTCTCTCTTCTTTGTTCATCCCGCGCTAGCATTCAAGGGTGGAGGACCATATGGGCAAGGGGTTACTAGGGGACAAGATCTTTCTGGCAAAGATTTCAGTGGCAAGACACTCATCAAACAAGACTTCAAAACGTCTATACTGCGACAAGCCAATTTTAAAGGTGCAAAATTATTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGACGCTGATCTTAGAAGTGCAGATTTTTCTCTGGCAAATGTTACAAAGGTAAATTTGAGCAATGCTAACTTGGAAGGTGCACTTGTAACCGGAAATACATCTTTTAAGGGATCAATTATTACAGGCGCCGATTTCACTGATGTGCCACTAAGAGAAGATCAACGCGTATACCTCTGCACAATTGCTGATGGAGTGAACTCAACGACTGGAAATGCTACGCGTGATACATTGCTGTGCAATTAG 657 0.4399 MALFLNASLSSTSKTHHRLSFSTTSTTPPPFLRTNPKQTQQPPPKLTLSFVESVSSATLVALLSASLFFVHPALAFKGGGPYGQGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRSADFSLANVTKVNLSNANLEGALVTGNTSFKGSIITGADFTDVPLREDQRVYLCTIADGVNSTTGNATRDTLLCN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01589 218 FunFam thylakoid lumenal 15 kDa protein 1, chloroplastic 75 218 - -
Vifa2g01589 218 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 15 218 IPR044213 -
Vifa2g01589 218 MobiDBLite consensus disorder prediction 16 43 - -
Vifa2g01589 218 SUPERFAMILY Pentapeptide repeat-like 86 188 - -
Vifa2g01589 218 Gene3D - 75 218 - -
Vifa2g01589 218 Pfam Pentapeptide repeats (8 copies) 110 148 IPR001646 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01589 - - gmx:100806792 309.686