Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01585 ATGGCGAAGCCAGAGAGTATTAGCAGAGGCTCAAGGTGGTCCCTCGCCGGATTCACAGCTCTAGTCACTGGTGGAACGCGTGGAATCGGACATGCTGTAGTGGAGGAACTGGCTGAGTTTGGTGCTACAGTGTATACTTGTTCTAGGAATGAACAAGAGCTTAATAAATGCTTAAAAGAGTGGAAAGGTAAGGGTTTTTCGGTTCATGGATCGGTCTGTGACGCGTCGTATTCTTCTCAAAGAGAGGAGCTTATTCGACAAGTGGCTTCTGCCTTCAACGGCAAGCTCAACATACTTGTAAACAATGTTGGAACAAATGTGAGGAAGCCAACAATTGAGTATACAACAGAAGATTATTCGAAAGTGATGACTACTAACTTGGATTCTGCTTACCATCTATGCCAACTCGCATATCCTCTTCTTAAAGAATCTGGAAATGGAAGCATTGTGTTTGTTTCCTCGGTTGCATCTCTCACAAGTGTAGGTTCGGGAACCATTTATGCAGCGAGTAAAGCTGCAATCAATCAGCTGACAAAAAGTCTGGCTTGTGAATGGGCGAAAGATAACATAAGGAGCAACGGCGTTGCACCTTGGTATACAAAAACATCACTTGTGGAACATTTGATTGCTAAGGAAGAGTTTGTGAATGAAGTACTATCTCGAACACCGATAAAGCGGATAGCAGAAACACATGAAGTGTCTTCCTTGGTGACTTTCCTTTGCCTGCCAGCTGCTTCCTACATCACTGGACAGATTGTTTCTGTTGATGGAGGATTTACTGTGAATGGATTTCAACCCAGCATGAGGATTACCTAA 816 0.4375 MAKPESISRGSRWSLAGFTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEQELNKCLKEWKGKGFSVHGSVCDASYSSQREELIRQVASAFNGKLNILVNNVGTNVRKPTIEYTTEDYSKVMTTNLDSAYHLCQLAYPLLKESGNGSIVFVSSVASLTSVGSGTIYAASKAAINQLTKSLACEWAKDNIRSNGVAPWYTKTSLVEHLIAKEEFVNEVLSRTPIKRIAETHEVSSLVTFLCLPAASYITGQIVSVDGGFTVNGFQPSMRIT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01585 271 FunFam Short-chain dehydrogenase reductase 5 265 - -
Vifa2g01585 271 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Vifa2g01585 271 Gene3D - 2 264 - -
Vifa2g01585 271 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Vifa2g01585 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Vifa2g01585 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Vifa2g01585 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Vifa2g01585 271 PANTHER TROPINONE REDUCTASE 12 263 IPR045000 GO:0016491
Vifa2g01585 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 262 IPR036291 -
Vifa2g01585 271 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Vifa2g01585 271 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Vifa2g01585 271 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Vifa2g01585 271 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Vifa2g01585 271 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Vifa2g01585 271 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01585 Vifa-Chr2 423851202 423852552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01585 12 266 Miscellaneous Gene Families AT2G29290 60.311 4.02e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01585 K08081 - gmx:100819646 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01585 2 423851202 423852552 Vifa2g01585 2 423851202 423852552 ECH