Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01533 ATGTCCGTCGCATGTGGTGTAGAGTGTGTTTTAGTCTTCGGCTGCGCGCGTTGGCTATGGAAACGGTGCACATACATCGGCTCCTACGACAGCGCCACATGGCCATCCGCCACCGCAGCTGAATTCGAACCGGTCCCACGCGTCTGCCGAGTCATCCTCGCCATCTACGAACCCGATCTCAAAAACCCCCAGCATTACCAACCTGCAAACGGCTACCGTTTGAACCCCGACTGGGTTATAAAGCGCGTGAGCTATCTAGAAACTGAAGGCCACGCGCCACCGTATATAATCTACGTCGATCATGACAATCGCGAGATTGTGATGGCAGTGCGTGGACTGAATTTAGCTAAGGAGAGTGATTATAAGATGTTGTTGGATAATAGATTGGGGAGACAGATGTTTGATGGTGGGTATGTTCATCATGGGTTGTTGAAATCTGCGGTTTGGTTGTTGAATAAGGAGTCGGAGACGTTGAAGAGGTTGTGGGTGGAGAATGGGTGTGAGTATGGGATGGTTTTTGCGGGGCATTCTTTGGGGTCTGGTGTGGTTTCGTTGTTGAGTATTTTGGTTGTGAATCATAGGGAACGCTTGGGTGGGATTCCGAAAGAGAAGATTAGGTGTTATGCTATTGCTCCTGCTAGGTGTATGTCGCTTAATTTGGCTGTTAAATATGCTAATCTCATACATTCCATTGTCTTGCAGGATGATTTCTTGCCAAGAACAGCCACTCCATTGGAAGATATATTCAAATCAATATTCTGCTTGCCTTGCTTATTATTCTTGGTTTGCTTGAGGGACACCTTCATACCTGAGGGTCGAAAGCTAAGAGATCCAAGGAGACTTTATGCACCTGGACGAATGTATCATATTGTGGAAAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTAAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGCAATACAACAGCGGATCATGCAATTATTTGGATAGAGAGGGAAGCAGAGAAAGCCTTACAATTAATGAAGGATCAAGACAGCACCAAAACTGTGACAGTCCCGCCAACGGTACAGAAGTTTGAGAGATTGAAGACCTTAGAAAAAGAACATAAAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTGGACACTGCAGAGAAAGAACCATCTGAAGAAAACAATGAAGGTGAGGCAGCATTCACTAGTAATGGCGACAAAGAAGCCGGAGCCGAAGCCGCCTCAAGTACCGAATCAAAACCTAGTGGTGGAAGATTAAACTGGGAAGAGGTTGTTGAAAAGCTATTGAAGAAGAGTGAAACAGGAGACAAACATATTCAAGGTGATACAAATGTCCCACATTGA 1380 0.4522 MSVACGVECVLVFGCARWLWKRCTYIGSYDSATWPSATAAEFEPVPRVCRVILAIYEPDLKNPQHYQPANGYRLNPDWVIKRVSYLETEGHAPPYIIYVDHDNREIVMAVRGLNLAKESDYKMLLDNRLGRQMFDGGYVHHGLLKSAVWLLNKESETLKRLWVENGCEYGMVFAGHSLGSGVVSLLSILVVNHRERLGGIPKEKIRCYAIAPARCMSLNLAVKYANLIHSIVLQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNTTADHAIIWIEREAEKALQLMKDQDSTKTVTVPPTVQKFERLKTLEKEHKDALERAVSLNVPHAVDTAEKEPSEENNEGEAAFTSNGDKEAGAEAASSTESKPSGGRLNWEEVVEKLLKKSETGDKHIQGDTNVPH 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01533 459 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 453 - -
Vifa2g01533 459 CDD Lipase_3 41 240 - -
Vifa2g01533 459 Gene3D alpha/beta hydrolase 33 252 IPR029058 -
Vifa2g01533 459 MobiDBLite consensus disorder prediction 383 459 - -
Vifa2g01533 459 SUPERFAMILY alpha/beta-Hydrolases 41 243 IPR029058 -
Vifa2g01533 459 MobiDBLite consensus disorder prediction 435 452 - -
Vifa2g01533 459 Pfam Lipase 3 N-terminal region 7 64 IPR005592 GO:0016042
Vifa2g01533 459 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01533 Vifa-Chr2 414198681 414201281 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01533 1 343 Miscellaneous Gene Families AT5G37710 75.510 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01533 - - gmx:100798831 726.472