Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01526 ATGGTCGCTTTGGTTTCTCAAGAAAATGTTGTCACATTGGTTTCTCGTACTGGTCGAGAGTTGCAGCGGTATAAAAAAGGTCGTCGTCAAGTTGTTGGATGTATACCTTACAGATTTAAGATTGGGGAGAAAAAATCTTTGGATGTTTTGGATGAATATGAAGTGCTTGTTATAAGTTCTCAGAATGGAAAAGGGATGTTATTTCCAAAGGGAGGTTGGGAATTAGATGAATCTCAAAAAGAGGCCGCTTTGAGAGAAACTATGGAGGAAGCTGGTGTCAAAGGCATTGTTGAGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAAACATATGACACTTTATATGATGGTTACATGTTCCCTTTACTTGTTCAAGAACAAATGGAGTTTTGGCCAGAACAAAACCTTCGTCAAAGAACATGGATGAGCATAAGTGAGGCAAGAGATATTTGTCAACACTGGTGGATGAAAGAGGCTTTGGACAGATTAGTAAACCGTCTTTTGGGTCAAAAACTTGTTCGTGAAAACCAAGTTTTACTTCGTCCTCTAAATTGCATTGGAGATGCCAAATCTGACTTGTTAATAGTGTAA 591 0.3841 MVALVSQENVVTLVSRTGRELQRYKKGRRQVVGCIPYRFKIGEKKSLDVLDEYEVLVISSQNGKGMLFPKGGWELDESQKEAALRETMEEAGVKGIVEGKLGKWSFKSKTYDTLYDGYMFPLLVQEQMEFWPEQNLRQRTWMSISEARDICQHWWMKEALDRLVNRLLGQKLVRENQVLLRPLNCIGDAKSDLLIV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01526 196 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Vifa2g01526 196 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 167 - -
Vifa2g01526 196 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Vifa2g01526 196 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
Vifa2g01526 196 Pfam NUDIX domain 53 162 IPR000086 -
Vifa2g01526 196 SUPERFAMILY Nudix 21 166 IPR015797 -
Vifa2g01526 196 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
Vifa2g01526 196 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01526 Vifa-Chr2 412423207 412424264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01526 K07766 - tpra:123917076 365.155