Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01525 ATGGAGGACACCAACTCCGATCAAGAGAAGCGACTATCGCAAAAAATCGCCGCAATTCTCGACGAAGTTCGAACCTCATACGCCACACACAACCGTAAACTCAAAGAACTATCTCTCCTCCGGTCCAAATCCACTTCACCGTCTCACTTCTTCTCCGCGTTTTCCAAATCCCTAATTTCCCTCTTCAAGTTTCAAAGACGAATCGCTTCCGCTGACCGTGTTGTTTCCTTCGTCGCCTCTTTCACTACTGCTCGTAATCCTTCCGATGCCGCGGTTTGCGACGAGTTCCTCGACCATTTCCTTCATTTCCTCCTTGTTGCTGCGACGGCGGCAGATAAGACTGTTAGATTCAGAGCCTGCCAGATTTTCTCCGAGATAATATTGCGGTTGCCAGATGATGCAGAAGTGAGCAATGACCTATGGGATGAGGTAATAGAGGGCATGAAGGTTAGGGTTCGAGACAAGATCCATTTGGTGCGTACTTTTGCGGTTAGGGCACTTTCGCGTTTCGTGAATGACTCTTCGAACGTTGACATTCTTGATTTATTCCTTGAGACGCTTCCTTTGGAGCAAAATGCGGATGTTCGAAAGATGATTGTATTGTCTTTGCCTGCTTCCAGTGCAACCTCTCAAGTTATTATTGATTGTACCTTGGATGTGAGTGAATCTGTTCGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAACTTTAAGCATTAAGCACAGGACAATAATTCTTCGGAGAGGACTAGCTGATCGATCTGTTAGTGTCTCGAAGGAATGTTTCAAACTATTGAAAGACGAATGGCTTATAAAATGCTGTAATGGCAATCCTTTACAACTTTTGAAGTATCTTGATGTTGAAACTTATGAATCAGTGAGCGAGTCTGTCATGGAAGCACTTCTAAAAGCTGGTTTAGTAAAACTAAAGAATGGTGCAAGTATCCAGCAATATATATCATCAAATGGCGACACAGCAGAAGGGGAAGCGGTTCGTTGTCCTCCAAGCATTGTATTGATGGAAGCAGAGGCTGCCCTTTATTGGAGAATTGTTTGCAAGCATTTGCAGTCAGAAGCACATGCCTTAGGCTCTGATGCTGCAGCCACAGCGGGTACCGAAGCAGAAGTATACGCTGCAGAAGCATCAGATAAAAATGATCTTCTAGAAAAGATTCTTCCTGCTACAGTTGATGATTACATAGAGTTAGTCAGAGCTAATATTGATGCTGGATCGAACCATCGCTTTACATGCCGGCAGCTGCTTTTGCTTGGTGCTATGTTTGACTTTTCTGACACTTCATATAGAAAAGCTGCTAGTGCGTTTCTGCAGGAGCTGATGAGCAAGCCTCCTGAGCATGAGGTTGATAATGAAGGGAATATTGTTTTCATTGGAGATGGCTTAAGTTTTGGTGGAGATACTCATTGGGCAGAAGCCATAGCCAAATTGGCAAGGAAAGTCCATGCTGCTCCTGGTGAATTTGAAGAAGTTGTTCTTGCAATCATAGAAAAGCTAGCTCAACCTTGCAGAGAGAGAACAGCAGATTATGTGCAGTGGATACACACCCTTTCCCTTATTGGCCTTTTACTGAAAAATACTGTGTCCATGCGCTTTCTTCAGGGCAAGGCTATAGAACCAGATGAACTACTCCAATCTTTACTTCTTCCCGGGGCAAAACAAGCTCTTGCGGACGTGCAAAGGATTGCTGTAAGATGTCTTGGCCTCTTTGGGCTTTTGGAGAGGAAACCAAATGCTGAACTTTTGAAACAGCTTAGGGTTTCATACATTAAGGGGCCACATATAATTAGTATAGAGGCTGCTAAAGCATTAATTGATCTTGTGATGTGGCATGGTCCTCAAGAAGTTGACAGGGTTTTAAATCACGAAGTTCCAAGCCAATTAAGCTGTGACAAAAAGTGTTTTTGTCCTGTGAACTTCTCTGATTTCGAAGGGGATTCAAATTCAAACGTTGACATACTTGATCTTTTATACGGTGGCTTTGAAAATGAAGACTGGGCTAATCCTTTAACTAGCAACGAAGATGAATGCATTTATGCTATACTTGGAGAAGGTTTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGCATACCGGCTTCTTTGCACCCTGTGCTTTTATCTAAACTCGTTTACTTGTACTTCAGTGATGTATCAGAAAATATGCACAGGTTGAAGCAATGTTTATCTGTTTTCTTAGAGCACTACCCGTGTCTCTCAACAAAACACAAGAGGTGTGTATTGAAGGCTTTCATTCCAGTTATGCGCTCAATGTGGCCAGGAATTTTTGGCAATTCTGGGGGTTCTCCTTTTATGGTGTCTCAGATGCGTAAGCGTGCAGTTCAAGCTTCACGTTTTATGTTGCAGATGGTGCAGATTCCATTACTTGTTAGAGAGACTGAAGCAGTGTGTGAAAACTCTAGTCCAGAAGTCCCGCAAGTTATAGATAATTATGCTGAAGTACCATTTGAGTGTGGTGAGGAGGGACTTGCACTACACATAGCCATAGAGGTCGCAAGCTTTCACTCAAAGAAGACAGCTGCTGAGAAGGCATATGTATCGGCATTATGTAGAATACTTGTCTCCCTTCATTTTCGGTTATCAGAACAAGGGCCCATTAAAGTTATGAGGAAGCTTTTAAATCGTCTGGCTGAATGTGTATCTTCGGAGAAGGATCTTGTTAAAGAATTAAAGCGCATGGCTGAGCATTTGATGACGGTTGACAGGCAACCAGATCAGGAGTTGTTGCAAGATGAAGTTAATCTCATTTTTGGGAAACTAGAACTTGAATTCAACATGGATTTGGATGCTTCTGTTGCAATCCCACAAACACCAGCTGTACAGCCAACGAGAGCCACACGTACAAGGAGAAGGGTAAGGATTGAGAAAGATAGTTCTGATTCTGACGACGAAGTTTCAATTGCTTCTGTGGTTCCTACAACCATTAATACTGTAAAAGGTCGCTCACAGAGAGCAAGCAAAACTGCAGCCATGAACAAGATGTCGTCTACCTGTAGAACACTTGACATTGATGAAATTGAAGATCTAGAGGAAGAAGAGTCGAATGTGACATCTGAAGATTCTGAAGAATTCGACCAGGATAGTTAA 3138 0.427 MEDTNSDQEKRLSQKIAAILDEVRTSYATHNRKLKELSLLRSKSTSPSHFFSAFSKSLISLFKFQRRIASADRVVSFVASFTTARNPSDAAVCDEFLDHFLHFLLVAATAADKTVRFRACQIFSEIILRLPDDAEVSNDLWDEVIEGMKVRVRDKIHLVRTFAVRALSRFVNDSSNVDILDLFLETLPLEQNADVRKMIVLSLPASSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQTLSIKHRTIILRRGLADRSVSVSKECFKLLKDEWLIKCCNGNPLQLLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQYISSNGDTAEGEAVRCPPSIVLMEAEAALYWRIVCKHLQSEAHALGSDAAATAGTEAEVYAAEASDKNDLLEKILPATVDDYIELVRANIDAGSNHRFTCRQLLLLGAMFDFSDTSYRKAASAFLQELMSKPPEHEVDNEGNIVFIGDGLSFGGDTHWAEAIAKLARKVHAAPGEFEEVVLAIIEKLAQPCRERTADYVQWIHTLSLIGLLLKNTVSMRFLQGKAIEPDELLQSLLLPGAKQALADVQRIAVRCLGLFGLLERKPNAELLKQLRVSYIKGPHIISIEAAKALIDLVMWHGPQEVDRVLNHEVPSQLSCDKKCFCPVNFSDFEGDSNSNVDILDLLYGGFENEDWANPLTSNEDECIYAILGEGFAKILLLSDNYPSIPASLHPVLLSKLVYLYFSDVSENMHRLKQCLSVFLEHYPCLSTKHKRCVLKAFIPVMRSMWPGIFGNSGGSPFMVSQMRKRAVQASRFMLQMVQIPLLVRETEAVCENSSPEVPQVIDNYAEVPFECGEEGLALHIAIEVASFHSKKTAAEKAYVSALCRILVSLHFRLSEQGPIKVMRKLLNRLAECVSSEKDLVKELKRMAEHLMTVDRQPDQELLQDEVNLIFGKLELEFNMDLDASVAIPQTPAVQPTRATRTRRRVRIEKDSSDSDDEVSIASVVPTTINTVKGRSQRASKTAAMNKMSSTCRTLDIDEIEDLEEEESNVTSEDSEEFDQDS 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01525 1045 Gene3D - 54 239 IPR011989 -
Vifa2g01525 1045 MobiDBLite consensus disorder prediction 1021 1045 - -
Vifa2g01525 1045 SUPERFAMILY ARM repeat 95 752 IPR016024 -
Vifa2g01525 1045 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 3 1038 IPR027165 GO:0000796|GO:0007076
Vifa2g01525 1045 Pfam Nuclear condensing complex subunits, C-term domain 526 875 IPR025977 -
Vifa2g01525 1045 MobiDBLite consensus disorder prediction 1020 1045 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01525 Vifa-Chr2 412044720 412052716 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01525 K06678 - gmx:100817677 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01525 2 412044720 412052716 Vifa2g01525 2 412044720 412052716 ECH