Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01523 ATGAGATATGGGTTGCTCGTTACATTTTGGAGGATCACCGAGATTGCTGGTGTGGTTCTTAGCTTTGACCCTAAACCAGTTGGGGGTGATTGGAATGGTGCTGGTGCTCACACAAACTACAGCACCAAGTCTATGAGAGAAGACGGCGGATACGAAGTCATCAAGAAAGCAATCGAGAAGCTCGGCAAGAGGCACGCCGAGCACATCGCTGCTTATGGAGAAGGCAACGAGCGCCGATTGACAGGGAAACACGAAACAGCCGATATTCATACCTTCTCATGGGGTGTTGCGAACCGCGGAGCTTCGGTTAGAGTTGGAAGGGACACAGAAGCAGAAGGGAAGGAAACTACCATCCTCGGGAAACCATAA 369 0.5068 MRYGLLVTFWRITEIAGVVLSFDPKPVGGDWNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGKRHAEHIAAYGEGNERRLTGKHETADIHTFSWGVANRGASVRVGRDTEAEGKETTILGKP 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01523 122 FunFam Glutamine synthetase 3 117 - -
Vifa2g01523 122 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 8 118 - -
Vifa2g01523 122 SUPERFAMILY Glutamine synthetase/guanido kinase 11 111 IPR014746 GO:0003824
Vifa2g01523 122 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 25 41 IPR027303 -
Vifa2g01523 122 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 1 122 IPR008146 GO:0004356|GO:0006807
Vifa2g01523 122 PANTHER GLUTAMINE SYNTHETASE 10 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01523 Vifa-Chr2 410753867 410754620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01523 K01915 - csv:101221473 201.06