Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01331 ATGGCTTATGTACAAGGGTTTACTCCAACCTTGAAATTGGGTTTTGTGTTTTCTTCACTAGTTTCACCAAACCAGAGATACCCTTTGGTTTTCCCTTCATCAAAGTGTCGATTTTCGCTTAAATTTAATGATGGGTCATTCAAATTTCAAAACCCTTTATTTGTATCTGCAAAACCCATTAAGGGGACAAAATCGGTGGAGCTTGACCGGTTTGTGACCAGTGATGATGAAGAGGAAGAAGAAATGGGAGATGGGTTCTTGGAAGCAATAGAGGAGCTTGAGAGGATGACTAGAGAGCCTTCTGATGTTCTGGAGGAAATGAACGATCGTCTATCGGCTAGAGAGCTTCAGCTTGTGTTGGTTTATTTCTCTCAAGATGGGAGAGATTCTTGGTGTGCTTTGGAGGTTTTTGATTGGTTGAGGAAGGAGAATAGGGTTGATAAAGAGACTATGGAGTTGATGGTTGCTATTATGTGTGGTTGGGTGAAGAAGTTGATTGAGGAACAGCGTGGTGTTGGTGATGTGGTTGACCTTCTTGTTGATATGGATTGTGTTGGGTTGAGGCCTGGTTTTAGTATGATTGAGAAGGTTATTTCTTTGTATTGGGATATGGGGGAGAAAGAAGGGGCGGCGTTGTTTGTGGAAGAGGTTTTGAGGCGAGGAGTTTCGTGGAATGAGGAGGATCCTCAAGGGCATAAAGGAGGGCCAACTGGGTATCTTGCTTGGAAGATGATGACTGAGGGTGATTACAAAGGTGCTGTTCGACTGGTAATTCGATTTAGAGAAGCTGGTTTGAAGCCAGAGATCTACAGTTACCTTGTTGCAATGACTGCCATAGTTAAGGAGCTCAATGAGTTTGCTAAAGCTCTACGAAAATTGAAAAGTTTCACTAGGGCCGGGCTGATTACCGAATTCGACCGAGAAGATGTTGAGCTAGCAGAAAATTACCAATCAGAACTTCTAGCCGATGGAGCTCGCTTATCCAAATGGGTGATTCAAGACGGCAGTCCTTCATCACTTCACGGCATTATTCACGAGAGGCTCCTCGCGATGTACATTTGCGCCGGCCGTGGAATCGAGGCCGAGAAACAACTATGGGAAATGAAACTTGTTGGCAAAGAAGCCGACGGAGGTTTCTATGACATTGTTCTAGCCATATGCGCTTCTCAGAAAGAGGACACAGCCACGGAAAGGCTAATGATGCGGTTGGAAGTTGCGAGCCCGCCGCAGAAGAAGAAAAGTTTGTCATGGTTGTTAAGAGGCTATATTAAAGGTGGCCATTTTAATGAAGCAGCAGAGACTCTGATGAAAATGCTTGAGTTGGGATTTTATCCAGAATATTTGGATAGAGTTGCTGTTGTTCAAGGTTTAAGGAAAAGGATTCATCAATATGGAAATTTAGATGCTTATATTAAGCTTTGTAAGTCACTTTCTGAAGCAAATCTTATAGGACCTTGTCTTGTGTATTTGTATACAAGAAAATATAAGCTTTGGGTTGTGAAAATGGTGTAA 1512 0.4279 MAYVQGFTPTLKLGFVFSSLVSPNQRYPLVFPSSKCRFSLKFNDGSFKFQNPLFVSAKPIKGTKSVELDRFVTSDDEEEEEMGDGFLEAIEELERMTREPSDVLEEMNDRLSARELQLVLVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIEEQRGVGDVVDLLVDMDCVGLRPGFSMIEKVISLYWDMGEKEGAALFVEEVLRRGVSWNEEDPQGHKGGPTGYLAWKMMTEGDYKGAVRLVIRFREAGLKPEIYSYLVAMTAIVKELNEFAKALRKLKSFTRAGLITEFDREDVELAENYQSELLADGARLSKWVIQDGSPSSLHGIIHERLLAMYICAGRGIEAEKQLWEMKLVGKEADGGFYDIVLAICASQKEDTATERLMMRLEVASPPQKKKSLSWLLRGYIKGGHFNEAAETLMKMLELGFYPEYLDRVAVVQGLRKRIHQYGNLDAYIKLCKSLSEANLIGPCLVYLYTRKYKLWVVKMV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01331 503 Gene3D Tetratricopeptide repeat domain 113 482 IPR011990 GO:0005515
Vifa2g01331 503 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 411 445 IPR002885 -
Vifa2g01331 503 PANTHER OS05G0353300 PROTEIN 24 503 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01331 - - gmx:100792633 805.823