Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01147 ATGCATCTCTACAATGCATGGTTGCCGCCACCTGTGGCGGCTCAGACCGCCGCCGAGAGAGACTCCTTCGCTCGCATCATCGCCGCCGTCAACTCTTCTTTCAACCGTGACGATCCCGAATCCGTTTACTTAACTCTCAAATACATCTCCGTCCTTGACCTATTTATAAAGGCGAAAAGTGTTGTGTCTTTGGAGGATGTCCGCAGCCTTATTCAGACCGGCCTTGAATTATTTCACATGTCCCGTAATAAGCTTTACCCCCAGGTTAGGTGGGGAAATTTATTAGTCAGACTACTCAACAAGTATAGGAAAAAGATTTCACTGACTATTGAATGGAGGCCTCTGTATGATACACTGGTTAGCACACATTTTACTAGAAGTACAGGCCCAGAAGGTTGGAGAGTAAGACAACGGCATTTTGAAACTATAACTTCACTTGTTCAGTCCTGCCGAAGATTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTATTGCAAAACCCATGGCATAATTCATCATTCGAAGGATCTGGGTTCACTAGATTGTTTCTCCCAACAAATTTGGACAATCAGGCCTTTTTTACACATGATTGGATTACAGAGTGTCTAGATTTGTGGGAGTCCATACCAAATTGCCAATTCTGGAACAGTCAGTGGGCGGATGTCATAGCCCGTGTTGTAAAAAATTACCACAATGTTGATTGGGAGGGACTCTTGCCTTTGCTTTTCGCTAAATACTTAAATATGTTTGAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCCTATTCACTGGATGTCCCAAGAAACACAAGGTTCTTGTTTTCCAATAGAACTTCCACCCCTGCAAAGGCTATCTCCAAGTCAATTGTATATTTGCTAAAACCTGGTAGTTCCGCAAAACAGCACTTTGAGAAATTGGTCAACATTTTGGAACAATATTATCATCCCTCAAATGGTGGTCGTTGGACTTACTCATTGGAGAGGTTTTTGTTTCATTTGGTGATTCAATTTCAGAAGCGTCTACAGAATGAGCAGTTGGGCATAAATAATTGTAGACCTACTGAACAGCATCTTGGAGAATCAGAGAGGGTCTTCTTTGTGAACACAATGCTTAAGTTAATCGACCGGGGACAATACAGCAAGAATGAGCATCTCTCTGAGACAGTTGCTGCAGCAACTTCTATACTTTCTTATGTGGAACCCTCACTGGTTCTTCCATTTGTGGCATCTCGGTTTCAAATGGCCCTTGAGACGATGACTGCTACCCATCAGTTGAAAATTGCAGTTATGTCGGTGGCATTTGTTGGGCGTTCACTATTTTATACATCTGTATCAGCTTCTTCCATGAAAAAGGTGGATTTTGGTGGTGGTGATGAAACATTCATTGATCTTATTGGGGTTTCATTATCCAATGCATTACTTGGCATGGATGCTAACGACCCTCCAAAAACTTTAGCTACCATGCAATTAATTGGTTCCATCTTTTCAAATTTGGCTTTATTGGATGATAAAATTGATGACTTATCCTTTATGCCAATGATCCGTTTTTCTGAATGGCTGGATGAGTTCTTATGCCGTCTGTTTTCCTTACTTCTACACTTAGAACCCAGCAGTGTTTTAAATGAAGGACTTCACTCATCAGCTTCATCAGGAACTTTCCTAGTTGATGATGGTCCATACTACTTTTGTGTTCTTGAAATTCTTCTTGGGAGGCTTTCAAAATCACTATACAATCAGGCCTTGAAGAAAATTTCAAAGTTTGTGAGGACAAATATTCTTCCTGGTGCTATTGCAGAGGTTGGTCTGCTCTGTTGTGCGTGTGTTCACTCCAACCCGGAAGAAGGAGTCAGTCAACTTGTTGAGCCAATATTAGTGTCTGTGATATCCTCTTTGAAAGGAACACCAGGCACTGGATTTGGAGGAGCTGGGACTTTTGATACTTCTGCTTCAGCCAAGGTTAGGTCCACAATTTCACCTGCTCTTGAGGCTGCAATCGACTATCAACTAAAGGTATTATCAGTTGGCATCACATATGGAGGTCCAGCACTTCTCCGCTACAAGGATCAATTAAAAGAAGCTATCTTTTTGGCTTTTGACTCACCATCTTGGAAGGTTAATGGGGCTGCTGATCATCTTCTTCGGTCCCTTCTTGGAAGTCAGATTCACTATTATCCAATAGACCAATATAAGTGTGTTCTTAGTCACCCTGATGCTGTTGCTCTTGAAGAATGGATTAGCACAAAAGATTTTTCCACTGCTGAAAGGTTGATTCCAAAGTGGCATATTCCTTGTGATGAAGAAATTCATTTTGCAAACGAGCTTTTAGATATTCACTTTAAGTCTGCTTTGGATGAACTGTTGAAAATATGCCAAACTAAAATTCATGCTGATCAAGGAGATGAGAAAGAGCACTTGAAAGTGACTCTTTTACGTATTGAATCATCATTGCAAGGACTCTTTTCTTGCTTGCCTGATTTTGTCCCAGACTCTAGGAATGGAATGGTTGAAGATCCAAAGAATATATTTCTAATTGCTGGGGCAACTGGCTGTACTGTTGGAACTACTGGTCTGAGAGAAAAAGCTACTGAGACTATACATGCAGCCTGCAAATACGTCCTCGAGAATAAATCTGATGACAGCATCCTGTTGATACTCATCATTCGAATTATTGACGCTTTGGGAAATTATGGAAGTTTAGAATATGATGAGTGGTCTAGTCACAGACAGGCTTGGAAGTTGGAATCTGCTGCCATAATAGAACCACCAATTAATTTTATTGTGTCATCCCATTCTAAAGGAAAGAAGAGACCTAGGTGGTCTCTTATTGACAAGGCATTCATGCACAATACCTGGAGGTCTTCACAAGCATCCTATCATCTTTACCGTACAAGTGGGAATTACTCTCCATCTGAGCACGTGACTAATTTGATGGATGATTTGTTGAGTCTTTGTTTGCATAGCTATGAAACTGTCCGCCTGCTTGCAGGAAAATCTCTAGTGAAGCTGATCAAGAGATGGCCATCTATGATTTCAAAATGTGTCATGACTCTTACTCCTAACTTGCAGGACCCCAATGCCAAGGAGTATTCAGTCTTGGGTTCTTGTTCAGTCCTTGCCTCACAGACAGTTCTCAAGCATTTGACTACGGATCAAAAGTCATTCTCTTCATTTATCTTGTCAATTCTTTCTAGTTCTCATCACGAATCCTTGAAATCTCAGAAAGCAATTAATGAGCTTTTTGTGAAGTACAACATCCAATTTTCTGGAGTATCTAGAAGCTTTTTCAGGATATCAGACACAGACAAGCATACTGGTGGACTGGGTTTTCCCGATTTGGTTTCTCAGATTGGTTCTATGAGTTTTGATTCTACTGGCTTGCATTGGCGGTATAATTTGATGGCTAACAGAGTCCTTCTCCTGCTGGCTTTGGCATCTCGGAGCCATCCAAATTCATCATCTAAAATCCTGAGTGAAGCTGCTGGCCACTTCTTGAAGAATCTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCTATTTCCGCTCTGAATACATTATTAAAGGAATCACCTTATAAGCTGTCTCCTGGTGAGAAATCTGGCGTACTCAAGGATTTGAAAGGCCATGTCAAGTCATCCCTTGAAGGAGCTTTAACCCAAACGTTTCAGGAAGATGGTTTCTTCGATGATACACTCACCAGTCTTTCTCATGTTCATATAATTACTGATAACGAATCTGCTTCAAGGGGAAATCAAGGAGATTCCAGTATTCAAAGCTTAGCAGACAAATCTATAACCCGTTTTTATTTTGAATTTTCGGCTTCATGGCCACGTACTCCCAGTTGGATCTCCTTTTTAGGAAGTGATACATTCTACTCAAGTTTTGCTCGTATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTGTAGTGTTGGCACTTAAAGGTGCAGTAGATGAGTTTACAATTGCTAAGGAGAGGTCTAAACAATGTGTAGCTGCTGAAGCATTGGCAGTTCCTGAGTGGTCCTCTTGCATAAGATATGCAGTTACTGGTAAAGGGAAGTATGGAACAAGAGTTCCTCTTTTGAGACAAAAAATTCTGGATTCCTTGATGGAACCTTTACCTCCAACAGTAGCTACGACTGTAACATCCAAGCGATATGCTTTTCTGGCTGCTGCACTTATAGAAATATCCCCACAGAAAATGCCAGTAGCTGAAATCCAGCTCCACATTACACTTCTGAAGGAAGTTCTTGGTAACATGTGCCACTCCTCAGCCCAAGTAAGGGAGGCTCTAGGGGTTACCCTTTCTGTATTGTGCTCTAACATTCGGCTATATCATTCAAGTGATCATGATAATGCGGGTGATGAGAGAACCAAAAATGTTGATGATAATTTGATAAAAGATGAAAGCTGGGTTCAGTATCTTACAGAGAGAGCAGCTGAAGCAGTTGTGAACATTCAGATTGCTTCCCAATCAGATAAAGCTGTGAATCCGATAGATTCAAGTTCTCAAAATGGTCATGTAGATGGTGATTCACAAGATGATATGAAATGGATGGAAACGCTACTCTATTTCATCATCTCATCATTGAAGTCTGGGAGGTCCTCTTATCTCCGCGATGTGATTGTGGGACTTCTTTATCCTGTGATTTCCTTGCAGGACACATCAAATAAGGATTTGTCAACATTAGCCAAGGCAGCATTTGAATTACTAAAATGGATGATTGTTTGGGAACCTCACCTCCAGAAGGCCATAACTGTGATTCTTTCTGCTGCTAATGATTCCAACTGGCGAACTAGATCTGCTACATTGACATATCTGCGTACTTTCATGTACAGGCACACTTTCATTCTCTCAAGTTCAAAGAAACAAGAAATTTGGAGAACAGTTGAGAAGTTATTAATAGACAACCAAGTAAGAGAACATGCTGCAGCAGTTTTAGCAGGCTTAATGAAGGGTGGAGATGAAGAACTTGCTAAAGATTTCCGTGATCGAGCTTATGTCGAGGCTAATATTGTACAAAAAAGAAGAAAATCAAGAAACGCAAGCTCTGGTTCATCTGTAGCATCTATTCATGGTGCTGTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCTTATGATATGCCCAGTTGGTTGCCGGAGCATGTTACATTACTAGCCCGCTTTAGCGGGGAACCGTCTCCTGTGAAATCAACAGTTACAAAAGCTGTTGCAGAGTTCCGGCGGACCCATGCTGATACATGGAATGTTCAGAAAGAGTTATTCACTGAAGAGCAACTTGAGATTCTGGCAGATACATCCTCTTCATCATCATATTTTGCTTGA 5349 0.4119 MHLYNAWLPPPVAAQTAAERDSFARIIAAVNSSFNRDDPESVYLTLKYISVLDLFIKAKSVVSLEDVRSLIQTGLELFHMSRNKLYPQVRWGNLLVRLLNKYRKKISLTIEWRPLYDTLVSTHFTRSTGPEGWRVRQRHFETITSLVQSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFTRLFLPTNLDNQAFFTHDWITECLDLWESIPNCQFWNSQWADVIARVVKNYHNVDWEGLLPLLFAKYLNMFEVPVANGSGSYPYSLDVPRNTRFLFSNRTSTPAKAISKSIVYLLKPGSSAKQHFEKLVNILEQYYHPSNGGRWTYSLERFLFHLVIQFQKRLQNEQLGINNCRPTEQHLGESERVFFVNTMLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFQMALETMTATHQLKIAVMSVAFVGRSLFYTSVSASSMKKVDFGGGDETFIDLIGVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMIRFSEWLDEFLCRLFSLLLHLEPSSVLNEGLHSSASSGTFLVDDGPYYFCVLEILLGRLSKSLYNQALKKISKFVRTNILPGAIAEVGLLCCACVHSNPEEGVSQLVEPILVSVISSLKGTPGTGFGGAGTFDTSASAKVRSTISPALEAAIDYQLKVLSVGITYGGPALLRYKDQLKEAIFLAFDSPSWKVNGAADHLLRSLLGSQIHYYPIDQYKCVLSHPDAVALEEWISTKDFSTAERLIPKWHIPCDEEIHFANELLDIHFKSALDELLKICQTKIHADQGDEKEHLKVTLLRIESSLQGLFSCLPDFVPDSRNGMVEDPKNIFLIAGATGCTVGTTGLREKATETIHAACKYVLENKSDDSILLILIIRIIDALGNYGSLEYDEWSSHRQAWKLESAAIIEPPINFIVSSHSKGKKRPRWSLIDKAFMHNTWRSSQASYHLYRTSGNYSPSEHVTNLMDDLLSLCLHSYETVRLLAGKSLVKLIKRWPSMISKCVMTLTPNLQDPNAKEYSVLGSCSVLASQTVLKHLTTDQKSFSSFILSILSSSHHESLKSQKAINELFVKYNIQFSGVSRSFFRISDTDKHTGGLGFPDLVSQIGSMSFDSTGLHWRYNLMANRVLLLLALASRSHPNSSSKILSEAAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSPGEKSGVLKDLKGHVKSSLEGALTQTFQEDGFFDDTLTSLSHVHIITDNESASRGNQGDSSIQSLADKSITRFYFEFSASWPRTPSWISFLGSDTFYSSFARIFKRLVQECGMPVVLALKGAVDEFTIAKERSKQCVAAEALAVPEWSSCIRYAVTGKGKYGTRVPLLRQKILDSLMEPLPPTVATTVTSKRYAFLAAALIEISPQKMPVAEIQLHITLLKEVLGNMCHSSAQVREALGVTLSVLCSNIRLYHSSDHDNAGDERTKNVDDNLIKDESWVQYLTERAAEAVVNIQIASQSDKAVNPIDSSSQNGHVDGDSQDDMKWMETLLYFIISSLKSGRSSYLRDVIVGLLYPVISLQDTSNKDLSTLAKAAFELLKWMIVWEPHLQKAITVILSAANDSNWRTRSATLTYLRTFMYRHTFILSSSKKQEIWRTVEKLLIDNQVREHAAAVLAGLMKGGDEELAKDFRDRAYVEANIVQKRRKSRNASSGSSVASIHGAVLALVASVLSAPYDMPSWLPEHVTLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKELFTEEQLEILADTSSSSSYFA 1782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01147 1782 Gene3D - 1528 1672 IPR011989 -
Vifa2g01147 1782 Pfam Proteasome-substrate-size regulator, mid region 520 825 IPR032430 -
Vifa2g01147 1782 Pfam Proteasome-substrate-size regulator, mid region 310 507 IPR032430 -
Vifa2g01147 1782 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1344 1782 IPR035309 GO:0016504|GO:0070577|GO:0070628
Vifa2g01147 1782 SUPERFAMILY ARM repeat 963 1664 IPR016024 -
Vifa2g01147 1782 Pfam Domain of unknown function (DUF3437) 1697 1782 IPR021843 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01147 Vifa-Chr2 309213374 309229684 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01147 K06699 - gmx:100781622 3128.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01147 2 309213374 309229684 Vifa2g01147 2 309213374 309229684 ECH