Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01134 ATGTCGAATCCCAATCAACCACAACCTTTCGATATGCACTCTTTCTTCAATCCCCCAAACCCTAATCTTAACCCTAGCCCTAATCCCATCATTTCTTCTCAATTCCCGCCGTCTGCTCCGTCACCTCCGCCGTCTTCTTCTTCCTCTTACCCTCCTCCCGCCGGTCCTTTTCCTCCTCAACCTTTCCCCCACCACCACAACAACAATAACTACCCCTACGATCAACACACCAATTTCCCAATCCACCACCGTTCACTTTCCTTCCCTACTCCCCCTCTTCAACCTCAACCTATCCCTCCACCTTCCAATCCCAATCCCAACGCCGGTGCACGTCTCATGGCTCTCCTCAGCGCACCCTCTCAACAACATCAACAACAGCTACAACAACAACAACCAGTTTCAGTCTCCGTTCCATTCTCTTCCGATTACGGCGGTGCATCTAATTTGCCTTCCCCTTCGCCTGCCGCCTCCATTACAGCCGCCAATGCAGCTGCTGCCGCTCTGATTCGCCTCCCGAGTAGTAAGGTTCCTAAGGGAAGGCACTTGATTGGGGACCATGTTGCGTATGACGTGGATGTTAGGTTGCCTGGTGAAGTACAGCCTCAGCTTGAAGTTGCTCCGATTACCAAATACGGGTCGGATCCTAATCCGATTCTCGGCCGACAGATTGCTGTGAATAAATCTTATATATGTTATGGGTTGAAACAAGGGAATATTAGGGTGCTAAACATTCATACTGCAGTTAGATCTTTGCTTAGAGGCCACACTCAGAGGGTCACAGACTTGGCGTTCTTTGCTGAAGATGTTCATTTGCTGGCTAGTGTTGGCACAGATGGCTGCGTCTTTGTGTGGAAAATTTCTGAAGGTCCGGATGGTGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTATTCAAATAGTAGGAGAGGAGAAAGTTGAACATCCTCAAATATGCTGGCACTGCCACAAGCAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTCTGAGAATTGACACCACCAAAATTGGAAATGGTGAAGCCTTTGTGGCAGAAGATCCTCCGAAATGTCCCATTGACAAGCTCATTGATGGGGTTCAGCTTGTAGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAGTCGACTGGTATCTGCATCACAGGACGGCACGATAAAGATATGGGAAGATCGGAAGACACAACCACTTGCTATTTTGAGACCTCATGACGGGCATCCTGTTTTTTCCGCTACGTTTTTTACTGCTCCTCACCAGCCTAATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAACTCTGGGTCTCATCAAATGAAGAAGGTTGGCTGCTCCCAAGCAATACTGAATCTTGGAAATGTACTCAGACTTTGGAGTTGAAGAGTTCAGCTGGGCCGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTCACGCAGGTCTGCTTTTACTTGCTAATGCACAGAGGAATGCTATATATGCTGTGCACTTAGGATATGGTCCTAATCCCGAATCAACTCACATGGATTATATAGCCGAGTTTACTGTGACCATGCCTATCCTGAGTTTTACTGGAACAAGTGATATTTTGCCTCATGGCGAACATATTGTTCAGGTTTATTGTGTTCAGACACTGGCTATTCAGCAGTATGCCTTGGATTTAGCACAATGCTTGCCTCCGCCATTAGAAAATGTGGGACTAGATAGGTTAGATTCCAATGTTTCCCGAGATGGAATTACTGCTGAAGGATTTGCCTCTTTAGACTCGTCTGCAGGTAGAACATCTGAGACGCCTTTACCCAGTTCTACTCCCAAAACAACAATGCAAGCAAGTAGCACTGAAAGCGGTCTTGTGGCAAGATACCCTTTAAGTTTGGGTCATATTGAGGCACCTATTTCTAGAGAAATCAGCAGTTCAAATATTGAAGCTAAAACTGTTACATTGGCTCCTTCTAGCAGTGATGCTAATATTGTTTGTGTTCCTTCTCCACCTCTTCCTTTGAGCCCAAGGTTGTCCAGAAAGCTTTCTGATTTCAGGAGTCCGCAATCTAACTTGAGCGATCATGTCGGGGACCAAGCTCTTAATGATTATTCAGTTGACAGACAAATGGACACCATTCACCGGAACTTGTCCGACCAATTGAATAGTGATTCAAAGAATGATGAAAATAAAATCAAACCGGATGACATTTCTAGTGTACTTAACCCTTCTGTCATGTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATTACAAAAGCCAGTTCCTCGTCTGAGACTAATATGATCGATAGAATGAGTAAAGTAGAAACTAAGATCCAGGATGTGGGTAATGCAGAAGTAGAGGTGAAAGTGGTAGGTGAGGCAAGGCCTAATCAAAATGATGAATTTGGAAGGCAGGGGCCACAACAAAATCCAGTTTCTGATGGCAAAGATAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCATTGAGGTGGCCCGAGAATTTTGTGCGATAGGTGGGGAAACTTACATTACAGAGGAACCCGGACAGGTTGATTCTACTGGAGGGGATTCACTGGCACAACCCTCTAATGCAGGCGAGGATGGACTTCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCTGACTCATCTACGTCAGCAGTAGTACCACCGTCACCTTCTTCTACTACAAAAGGAAAGAGACAAAAAGGTAAAAATCCTCAACCAACAGGTCCGTCTTCCCCATCTCCAAGTGTATGCAATTCAACTGATTCGTCCAATGAGCCAAATGGAATTTCAAATCTTCCATCTACTGAAAATGGTTTGCCTCAAATTATGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGATGGTTGCAGTTCCAGTTACCAAAGAGGGTAGAAGGCTTGAAGCCGCCCTAGGGAGAAGCATGGAAAAAGCTGTCAAGTCTAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATTCAACATGTTACAGGTTTGATTACTAACTTCACGAACAAGGATCTGCCAGCAATATTGGAGAAAACTGTAAAGAAGGAAATGGCTTCAGTTGGGCAAGCTGTAATTCGTTCAATGTCTCCTACTATTGAGAAAATAATATCCTCTACTATAGTGGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCAGTGAATCAACTTGATAAATCAGTTAATTCAAAACTCGAAGCTACTGTAGCTAGGCATATCCAAGCACAGTTTCAGACAACTGCCAAACAGGCGCTTCAGGATGCTCTGAAATCCAGTTTTGAAACATCAGTGGTTCCTGCATTTGAGATCTCCTGCAAAACCATGTTTGAGCAAGTGGATGCTACATTCCAGAAAGGCATGGCTGAGCATTCAAATGCAGTGCAGCAACGGCTTGAATCCGGGCCTACTTCATTGGCGATGACTCTAAGGGATTCCATTAATTCAGCCTCATCAGTTACTCAAACCTTGAGTAGAGAAGTGCTCGAGGGTCAGAGAAAGCTAATGTCGCTTGCAACCTCAAGAACAAGCTCAGGCACGTTGAATACCCTGCCCATCCAGCTGAACAATGGTCCATTACTTCATGAAAAGGTTGAGGCACCTCTAGATCCCACAAAGGAGCTAGCAAGGTTGATTTCTGAACGGAAATATGAGGAGGCATTTATTGCAGCATTGCATAGAAGTGATGTATCTATTGTATCGTGGTTATGCTCTCAGGTTGATTTACATAGACTTTTGACAATGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCTCTTTTGCAGCAGTTGGCGTGTGATATTAACAACGACATGTCCCGAAAGATCGCATGGATGACAGATGTGGCTACTGCCATTAATCCCTCAGATCCCATGATAACAATGCATGTCCGGCCCATATTCGAACAGGTCTACCAAATACTGAATCATCAACGTAGCTTGCCTACAATCACCGGTGCTGATCTTTCAAGTACCCGCCTTTTATTGCATGTCATCAACTCCATGCTTACGACGTGTAAATGA 4158 0.4449 MSNPNQPQPFDMHSFFNPPNPNLNPSPNPIISSQFPPSAPSPPPSSSSSYPPPAGPFPPQPFPHHHNNNNYPYDQHTNFPIHHRSLSFPTPPLQPQPIPPPSNPNPNAGARLMALLSAPSQQHQQQLQQQQPVSVSVPFSSDYGGASNLPSPSPAASITAANAAAAALIRLPSSKVPKGRHLIGDHVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPILGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGCVFVWKISEGPDGEDKPQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKIGNGEAFVAEDPPKCPIDKLIDGVQLVGTHDGEVTDLSMCQWMTSRLVSASQDGTIKIWEDRKTQPLAILRPHDGHPVFSATFFTAPHQPNHIVLITAGPQNREVKLWVSSNEEGWLLPSNTESWKCTQTLELKSSAGPSLKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLGYGPNPESTHMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENVGLDRLDSNVSRDGITAEGFASLDSSAGRTSETPLPSSTPKTTMQASSTESGLVARYPLSLGHIEAPISREISSSNIEAKTVTLAPSSSDANIVCVPSPPLPLSPRLSRKLSDFRSPQSNLSDHVGDQALNDYSVDRQMDTIHRNLSDQLNSDSKNDENKIKPDDISSVLNPSVMFKQPTHLVTPSEITKASSSSETNMIDRMSKVETKIQDVGNAEVEVKVVGEARPNQNDEFGRQGPQQNPVSDGKDKFFCSQASDLGIEVAREFCAIGGETYITEEPGQVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSDSSTSAVVPPSPSSTTKGKRQKGKNPQPTGPSSPSPSVCNSTDSSNEPNGISNLPSTENGLPQIMAMQDSLNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRIQHVTGLITNFTNKDLPAILEKTVKKEMASVGQAVIRSMSPTIEKIISSTIVESFQRGVGDKAVNQLDKSVNSKLEATVARHIQAQFQTTAKQALQDALKSSFETSVVPAFEISCKTMFEQVDATFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMSLATSRTSSGTLNTLPIQLNNGPLLHEKVEAPLDPTKELARLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHRLLTMVPLPLSQGVVLSLLQQLACDINNDMSRKIAWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRSLPTITGADLSSTRLLLHVINSMLTTCK 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01134 1385 SMART WD40_4 367 404 IPR001680 GO:0005515
Vifa2g01134 1385 SMART WD40_4 407 453 IPR001680 GO:0005515
Vifa2g01134 1385 SMART WD40_4 245 285 IPR001680 GO:0005515
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 605 634 - -
Vifa2g01134 1385 ProSiteProfiles Trp-Asp (WD) repeats profile. 252 289 IPR001680 GO:0005515
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 90 106 - -
Vifa2g01134 1385 Gene3D - 1297 1385 IPR044938 -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 1 19 - -
Vifa2g01134 1385 FunFam enhancer of mRNA-decapping protein 4 204 518 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 817 832 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 810 833 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 607 634 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 863 881 - -
Vifa2g01134 1385 Gene3D - 209 551 IPR015943 GO:0005515
Vifa2g01134 1385 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 21 1383 IPR045152 GO:0031087
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 691 711 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 899 958 - -
Vifa2g01134 1385 ProSiteProfiles Trp-Asp (WD) repeats profile. 371 413 IPR001680 GO:0005515
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 20 65 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 734 748 - -
Vifa2g01134 1385 SUPERFAMILY WD40 repeat-like 220 509 IPR036322 GO:0005515
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 1 110 - -
Vifa2g01134 1385 FunFam Enhancer of mRNA-decapping protein 4 1297 1383 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 66 84 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 695 711 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 862 958 - -
Vifa2g01134 1385 MobiDBLite consensus disorder prediction 730 750 - -
Vifa2g01134 1385 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 205 517 IPR032401 -
Vifa2g01134 1385 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 252 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01134 Vifa-Chr2 304142776 304152007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01134 K12616 - gmx:100798228 2036.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01134 2 304142776 304152007 Vifa2g01134 2 304142776 304152007 ECH