Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01073 ATGTCTCTTGGGTATGCTGAGAAACTTTCCTTCATAGAAGATGTAGGCAACGTTGGAATGACTGAACATTTTGACCCATCTACCATTTTGCGTGAAAAAATAGAGCAACTTGCTATTATGATTAAAAAGAGTAAGCATCTAGTAGTGTTTACAGGTGCAGGAATATCAACATCTTGTGGTTTACCTGATTTTCGAGGTCCCAAGGGAATTTGGACGCTTCAGCGTGAAGGTAAAGCCTTGCCTGAAGCATCATTGCCATTTCACCGTGCGGTGCCAAGCTTGACTCACATGGCTCTCGTTGAATTAGAAAAGGCTGGTATTTTGAAGTTTGTTATCAGCCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAAAAACTGTCTGAACTGCACGGGAATTCCTTTATGGAAACTTGCCCTTCATGTGGAGCTGAGTACTTTCGAGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACTTCACGGCGCTGTTCAGATGCAAAATGTGGGGCAAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCACTGCCTCCGAAGGAGATGAATCCGGCTGAGAAGCACTGCAAACAGGCAGATATAGTGTTATGCTTAGGGACAAGTCTGCAAATAACTCCGGCCTGCAACTTGCCTCTTAAAGCACTTCGTGGCGGAGGTAAAGTTGTCATTGTAAATCTCCAGAAAACCCCAAAGGACAAAAATGCCTCTCTAGTCATTCATGGGTTTTCCGATAAGGTAATTGCAGGTGTCATGGAGCACCTAAATCTGCGGATTCCTCCTTTCATCAGGATTGACCTTTTCCAGATTATTGTAGTGCATGCTTTGAGCAACGATAAAAGATATGTGAACTGGACTCTCCAAGTTGCAAGTTCTCATGCCCAGAAAGCAGCATTGCCTTTCGTCAAGTCTGTCGAGGTTTCCTTCTCGGACAAGGAAGGTTTCAAAGAAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGAAGAACAGCATATAACAAAACATTTGAAATGGTTCTAAACCTCAATTTTGGTGATGGCTGTGGTTGCTCGTCCCTTGAAGTTGATGTCCCGATTGATTTTATGAGTTCAACTGACTGCTTCAACTTCGACGAAGATATCATATTCCAAAAGCTGAGAGACAAGGCAGTCTTTGAGTCAAAATGTGGTCAGAATGCCGTAATCGAGAGAAAAGCCATCTTGACACCTAAAAGCCACATTACTACCTATGCAATCGTAACTAATGTTGTTCATTACAGCAAACCAGTCCCCGATTCTGTAACCAATGGTGATCTTAAAAAGAGAAAAGATCTCATGATTGGTACAGGATCGTCTTGGAAGCGTTCGAAAGTTTCTAAGGGTAAATCTATATCAAAGAAGGTGTGA 1416 0.4251 MSLGYAEKLSFIEDVGNVGMTEHFDPSTILREKIEQLAIMIKKSKHLVVFTGAGISTSCGLPDFRGPKGIWTLQREGKALPEASLPFHRAVPSLTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLSELHGNSFMETCPSCGAEYFRDFEVETIGLKETSRRCSDAKCGARLKDTVLDWEDALPPKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKNASLVIHGFSDKVIAGVMEHLNLRIPPFIRIDLFQIIVVHALSNDKRYVNWTLQVASSHAQKAALPFVKSVEVSFSDKEGFKEAILDKQPFRLKRRTAYNKTFEMVLNLNFGDGCGCSSLEVDVPIDFMSSTDCFNFDEDIIFQKLRDKAVFESKCGQNAVIERKAILTPKSHITTYAIVTNVVHYSKPVPDSVTNGDLKKRKDLMIGTGSSWKRSKVSKGKSISKKV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01073 471 Gene3D - 36 263 - -
Vifa2g01073 471 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 33 265 - -
Vifa2g01073 471 FunFam NAD-dependent protein deacetylase SRT1 135 184 - -
Vifa2g01073 471 Pfam Sir2 family 87 216 IPR003000 GO:0070403
Vifa2g01073 471 ProSiteProfiles Sirtuin catalytic domain profile. 27 267 IPR026590 -
Vifa2g01073 471 SUPERFAMILY DHS-like NAD/FAD-binding domain 6 291 IPR029035 -
Vifa2g01073 471 CDD SIRT7 45 251 - -
Vifa2g01073 471 Gene3D - 135 184 - -
Vifa2g01073 471 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 36 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01073 Vifa-Chr2 288811738 288817070 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01073 K11416 - gmx:100803586 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01073 2 288811738 288817070 Vifa2g01073 2 288811738 288817070 ECH