Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01061 ATGGGAGAGGAAGAACCAGTGACTGAAGTTGCTAAGACTGGTTCAAATGGCGGTAGCATTGCGGCCAAGACGTTAGATGAAGTTGTTGAAAAGAAAGATTTGGAAACTGATGGAGGGAAAGTTTTGGAGAGTAATGGACTCAAGGAAATTGAAAAGGATAAGAAAGCCGTTGATGTGGAAGAGGTAAAAGAGGATGAGAAAGCAGGTATAGTGGAAGAAGTAAAAGAGGATAAGAAAGATGATGGGGTGGAGGAAGTGAAAGAGGATAAGAAAAATGATGGGGTGGGGGAAGTGAAAGAGGATAAGAAAGATGATGGGGTGGGGGAAGTAAAAGAGGATGAGAAAGATAATAATGCTGATGAAGTAAAAAAGGTGACAGAAGATGATGCGGTGGAAGAAGTAAAAGATGATAAGAAAGAGGATGTGGCTGAAGAAGTAAAAGATGATAAGAAAGAGGACGTGGCTGAAGAAGTAAAAGATGATAAGAGAGAGGATGTGGCTGAAGAAGTAAAAGAGGAAAAGAAAGATGATGTGGCTGAAGAAGTAGAAGATGATAAGAAAGATGATGCGGTGGAAGAAGAAAAAGAGGAAATGAAAGTTGATGGGGTGGAAGAAGTAAAAGATAATGTGGTGGAAGAAGAAAAAGAGGATAAGAAAGTTGATGCGGTGGAAGAAGTAAAAGATGAAGGGGTGGAAGAAGTAAAAGATGAAGGGGTGGAAGAAGTAAAGGAGGATACAAAAGATGGTGAGGTGGAAGAAGTAAAGGAGGCTACAAAAGATGGTGGGGTGGAAGAAATAAAAGAGGATAAGGAAATCGATGTTGCCGAGGAAGTAGAGGTGGAAAAGAAAGATAATGGAGATGAAGATGTAAAAGAGGATATGGAAGTTGGTAGTGTGAAAGAAGCAGTGGAGGATAAGAAAGATGATGACATACAAGAAATAGAAGAGGATGACAAAAATGTTACTGAATCTGAGAATGAGGAAATGGATGTCGATACTGAGGTTAAGGAAACTACAGAAGGTAAAGAAGAAAAGGAAAAAATTGAATCTGAAAAAGAAGAAGCAGATTTGATGGAAACAGAGGGTAGCATTGAGGAAAAGGAAGAGGGCGATGGAGAGGAGAAAACTGAAGCAGAGATAGCGGAGAAGGAAGAGGGCGATGGAGAGGAGAAAACCAAAGCAGAGATAGAGGAGAAGGAAGAGGGCGATGGTGAGGAGAAAACTGAAGCAGAGATAGAGGAAAAGGAAGAGGGTGATGAAAAGGAGGAATCTGAAGCAGAGACAGTGGAGAAGGAAGAGGGTGATGAAAAGGAGAAAACTGAAGCAGAGACGGAAGAGGAGCGGGAGGAGGAGGATGACAAGGACGGTATTGATAAATCAAAAGAAGAAGATAAGTCAGAGGGTAGTAAGGGTGAGAAAGGATCAAGAAAGCGTGCGAGAGGGAAGGTTAACGAGGAGAAAGTGAAGGAGAAAAGAAAGGAACTGAAACAGCTAGAGCCTAAGACTCCTACAAGTGATCGTCCAGTTCGAGAAAGGAAATCAGTTGAGAGGTTGGTAGCAATAATTGATAAAGAGACGAGCAAAGAATTACACATTGAGAAGGGTCGTGGCACACCTTTAAAAGATATACCCAATGTGGCATATAAGTTATCTAGAAGGAAAACTGATGATAGTCTCAAGTTGCTTCATACAATCCTCTTTGGGAGGAGAGGGAAGGCAGTTCAGGTCAAGAGTAATATATTGAGGTTTTCTGGTTTTGTATGGCATGACAATGAGGAGAAGCAAATGCTTAAAGTAAAAGAAAAGCTAGACAAATGTTTTAAAGAGAAGTTACTGGAATTCTGTGATGTGTTTGACATAACAGCAATCAACAAGTCAACAATAAAAAAGGAAGATGTTATTACTAAGCTGATAGACTTTTTGCTTGCCCCTCATGCAACCACAACTGTGCTACTTGCAGAAAAAGAGTCCAGTAAAAAGCGCAAGCGTCCTGTAAAACGAGGTACATCAAGGTCTAGGACTAGTACTTCAAGAGGTTCTGCAAAGAGGCAGAAGAAAACTGAAAGTTCTCCAGGAGTGGAGAAAAAGAGCACAACTGACACAGAAGATGAATCAGAGGGAGAGGAGAAAAATGAAGAAAATGAGGATGAAACTGACAATGACATTCCTGAGAAATCTGAAGATGAAACGGCAGAGAAATTTGAAAGGGAAGATAAAAGCGATTCTGGTAGTGAATCTGATGATGTGAAAAAAAAGAGGAAACATTCTAAATCATCATCTGTGAAGAAAGAGTCCTCTGGAAGAAGCAAAATCGAGAAAACTATGGTCACAAATAAATCTCGCTCACCACCTAAGAGAGCACCTAAGAAATCATCAAATACCCAACCAAAGTCTGATGATGATATTGATGAAAGTCCAAAGGTATTTTCTAGGAAGAAGAAAAATGAGCAAGGGGGAAAGCAGAAGATATCAACTTCAACTCCAACTAAGTCTTCATCAAAGTCCAAAGAGAAAACTGAAAAGGTTGCCAAGGGAAAAGGCAAGAAGAAAGAGAAGTCCTCAAGTCCCAGTGATAATCAGTTGCGCGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCCACATTTACTGACATTCTGAAGCTACTCGCTAAACAATTTGATGTGGATCTCAACCCAAAGAAGGCAGCTATCAAGCTCATGATTCAGGAGGAGCTGACAAAACTAGCTGAAGAAGCAGATGATGATGAAGACGATGATGATGAAGAAGAGGCCGAGAAAGACGAAGGCCGATCTACCGGCCAGGAGACCTAA 2823 0.4067 MGEEEPVTEVAKTGSNGGSIAAKTLDEVVEKKDLETDGGKVLESNGLKEIEKDKKAVDVEEVKEDEKAGIVEEVKEDKKDDGVEEVKEDKKNDGVGEVKEDKKDDGVGEVKEDEKDNNADEVKKVTEDDAVEEVKDDKKEDVAEEVKDDKKEDVAEEVKDDKREDVAEEVKEEKKDDVAEEVEDDKKDDAVEEEKEEMKVDGVEEVKDNVVEEEKEDKKVDAVEEVKDEGVEEVKDEGVEEVKEDTKDGEVEEVKEATKDGGVEEIKEDKEIDVAEEVEVEKKDNGDEDVKEDMEVGSVKEAVEDKKDDDIQEIEEDDKNVTESENEEMDVDTEVKETTEGKEEKEKIESEKEEADLMETEGSIEEKEEGDGEEKTEAEIAEKEEGDGEEKTKAEIEEKEEGDGEEKTEAEIEEKEEGDEKEESEAETVEKEEGDEKEKTEAETEEEREEEDDKDGIDKSKEEDKSEGSKGEKGSRKRARGKVNEEKVKEKRKELKQLEPKTPTSDRPVRERKSVERLVAIIDKETSKELHIEKGRGTPLKDIPNVAYKLSRRKTDDSLKLLHTILFGRRGKAVQVKSNILRFSGFVWHDNEEKQMLKVKEKLDKCFKEKLLEFCDVFDITAINKSTIKKEDVITKLIDFLLAPHATTTVLLAEKESSKKRKRPVKRGTSRSRTSTSRGSAKRQKKTESSPGVEKKSTTDTEDESEGEEKNEENEDETDNDIPEKSEDETAEKFEREDKSDSGSESDDVKKKRKHSKSSSVKKESSGRSKIEKTMVTNKSRSPPKRAPKKSSNTQPKSDDDIDESPKVFSRKKKNEQGGKQKISTSTPTKSSSKSKEKTEKVAKGKGKKKEKSSSPSDNQLRDAICEILKEVDFNTATFTDILKLLAKQFDVDLNPKKAAIKLMIQEELTKLAEEADDDEDDDDEEEAEKDEGRSTGQET 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01061 940 MobiDBLite consensus disorder prediction 912 940 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 308 334 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 355 373 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 912 930 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 276 307 - -
Vifa2g01061 940 Coils Coil 341 361 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 792 819 - -
Vifa2g01061 940 SUPERFAMILY DEK C-terminal domain 850 909 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 833 857 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 653 861 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 454 512 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 704 725 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 335 354 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 726 770 - -
Vifa2g01061 940 Pfam DEK C terminal domain 856 909 IPR014876 -
Vifa2g01061 940 FunFam DEK domain-containing chromatin associated protein 846 911 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 401 431 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 771 791 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 439 453 - -
Vifa2g01061 940 Gene3D - 846 911 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 73 512 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 192 269 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 1 21 - -
Vifa2g01061 940 Coils Coil 405 452 - -
Vifa2g01061 940 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 855 910 IPR014876 -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 681 703 - -
Vifa2g01061 940 PANTHER DEK PROTEIN 369 928 IPR044198 GO:0003677|GO:0006325
Vifa2g01061 940 Coils Coil 909 929 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 73 181 - -
Vifa2g01061 940 MobiDBLite consensus disorder prediction 374 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01061 Vifa-Chr2 286709962 286718896 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01061 K17046 - gmx:100818537 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01061 2 286709962 286718896 Vifa2g01061 2 286709962 286718896 ECH