Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01018 ATGTCATCAAACCATAACCTAAAAGACCTACAATGGTTTCTTCAAACAATCACCATGGAAAACCAAAACCTACACAGCATTTCCTTCTACCTTTCCCAACCAACTTCACATTGTTACCAAGAAACAAACAACTCCATAAACATCAACATCTCCAAAGAAAATCATCACCACTTTTCCAACCTCTTAACATCACTAGCATCATCATCCAACAACACAAACCCCACTTTAAGAAACCTAGAGTTCCACATAGTTGAATGGGAGTCACAACAGGTAAAAAACCTTGGAACCCTTCTGAATAATCACCAAACCATAAAGCAAATTATTTTCAAAAGAAACAGGTTCAATGGAAAAACAATGTTAGATCTTTCTGAGATTTTGAGGGAAAACAAAGTGATTAAAGAGATTATGTTTTCAGAATCATGTATTGGTTCTATTGGAGCTGAATTAATAGCTTCTTCTCTTATGGTGAATCATAGTTTAGAGGAATTACAGATTTGGGAAGATTCAATAGGTTCAAGAGGTGCTGAAGAGATTTCAAAGATGATTGAAGTTAATCCATCTCTTAAACTGTTAACAATTTTCGACTCGAGTTTCATCGCAGCTACGCCTCTTATATCGTCGGTTTTGGCAAGGAATCGGGCTATGGAAGTTCATGTTTGGAGCGGAGAACTAAATGGTGAAAGAAGTTCAAAGGTTGTTGAGTTTGTACCTGGTAACAATACTCTTAGAATTTACAAGCTTAATCTTTCGGGTACTTGTAGGGTTGCTTGTTCTTTAGGAATGAATTTGACTGTTAAATATCTTGACATGACTGGTGTGAAGATAAAATCGAAATGTGCTAAGGAGTTTAGATGGGTTTTAGAACAAAACCAATCGCTTAAAGAGGTTAATTTTTCGAGAACAAGTCTTAAAGATAAGGGTGTTGTGTACATTGCTGCTGGGCTATTCAAGAATCATAGTCTGCAAAAGTTATATCTAACGGGAAATTTGTTCGGTGGAATAGGCGTCGAGCATTTACTTTGTCCTCTTAGTAGATTTTCGTCCTTGCAAATGCAGGCTAACATTAGTTTAAAGTGTGTTACTTTTGGAGGAGGGGGGACAAGAATAGGAAGAGATGGTTTAGCAGCTATAACGCGGTTTCTAATGACGAATGAGACGGTGACGCGGTTCGGGATACATGATGACGAGAGTTTGAGACCGGATGATTTTGTTAAAATCTTTAAGAGTTTAGAGAAGAATGCGAGTTTGAAATGTTTGTCGTTGCTAGGTTGTAAAGGTGTTCAAGGAGAGACACTGCTGGAGATAATCATGGAGACACTTCAGATTAATCCTTGGATTGAAGAAGTTGATCTTTCAAGAACACCTTTACATAACTCTGGAAAGACTATTGGGATTTATCAGAGATTAGGACAGAATGAGAACCCTGAACCAGAAATTGATTTGATCAAAGACATGCCACTGACTGAGCCTAAGAGTTGCAGAGTTTTCTTTTGTGGACAAGAATATGCAGGCAAAACCACACTCTGTCAATCAATATCACAAAACTTCTCGGCTTCGCCAGCACTTCCCTACTTGGATCAAGTAAGAACAATAGTGAATCCAGTGGAGCAGGCTATGAAAACAGTAGGAATGAAGATAAAAACATTCAAGGATGAGGATACAAAGATTTCAATATGGAATCTTGCTGGTCAGCAAGAGTTTTTCTCCCTCCATGATCTTATGTTTCCGGGGCACGGTAGTGCGTCGATTTTCATCATCATATTGAGTTTATTCAGGAAGCCGAGTAACCGAGAACCAAAAAGCACTGCAGAGATTGAAGAGGATTTGCAATATTGGCTAAGGTTCATAGTTTCCAACTCCAAAAGAGCAGTGCAACAATGCATGCTACCGAGTGTAGCTGTTGTTCTTACACACTTCGATAAAATCAACCAATCATCACAAAATCTGCAGCAAACAGTTGATTTGATTCAAAGATTGAGAGATAAGTTTCAAGGCTACGTTGAGTTCTACCCGACTGTATTCACGGTTGATGCAAGATCATCAGCATCAGTTTGTAAACTCACTCATCACATTCGAAAGACGTGCAAAACAATACTCCAAAGAGTACCACGAGTTTATCAACTTTGCAACGAACTCATGCAGATTTTATCAGAGTGGAGATCGGAGAATTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGATCTGTGTCAAGTAAAAGTCCCGTATTTGAGAATACGGTCGAGACATTATAATAAAGAGGCGGTGGAAGTGAAGCGAAAAGCTATTGCTACTTGTCTTCATCATATTGGTGAAGTGATTTATTTTGATGAGTTGGAGTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGTACTTGGTCAGCTCTTGAAGTTGAACGTTAAAAAGCAACATTCTTCGGAAAACAACGGGTTCATTAGCAGGAAGGAACTGGAGAAAATTTTAAGGGGAAGTTTACAAAGTCCAATTCCTGGTATGGGATCAAAGGTGTTTGAGAACTTAGATGCTAGTGATCTTGTCAGAATGATGCTTAAACTTGAACTTTGTTATGAGCAAGATCCATCAGATCAAAATTCTCTATTATTGATTCCCTCCATTCTCGAAGAAGGTAGAGGAAAGCCTCAGAGGTGGCAGATAAGCTCGCCAGATTGCCTTTATGCCGGACGCTATCTTGAATGCGATGATTCAAGTCACATGTTTCTAACTCCGGGATTCTTCCCTCGCTTACAGGTGCACCTCCACAACAGAATAAAGTCTCTGATGAATCAACACGGTGCAACTTACAGTCTCGAGAAGTACCTCATTTCAATCAGCATTAATGGAATCTACATCAGAGTAGAGCTTGCAGGACAACTCGGTTACTATATTAATATCCTCGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCAGCAACTTATAATCCCGGCAATTCAAAGTGTTTGCCATGGGATCACAATGACGGAAAATATCATTAGACCTGAATGCGTGCGAAATTTGACACCCCCTAGATACAGAAGAACTCAAGTTGCTTCCTTGCAGCAACTGAAACAAGCACTCCTTTCACTTCCGGCAGACAGCATGTATGACTATCAACACACATGGAGTTCGGTATTGGATTCTGGAAGGCCTATTCTCCAAGAAGGGTTTGATTTTGCGCGAGACCTTTTATCGGATGATGATTTCCGAGAAGTGCTTCATCGCAGGTATCATGACCTACACAATCTTGCTCAGGAGCTGCAAATCCCGCCTGAAAGCAACACTGAAGGGCAAAATCAAGCTGTAACCTTAAGCAATGAAGCTGAAAAAGTCGAACCATCCTTTGGTGGCATTGCAAAAGGGGTTGAAGAAGTTTTACAAAGGCTTAAAATTATTGAACAAGAAATTCGAGACTTGAAACAAGAAATCCAAGGGATGAGATATTACGAACACAGACTCCTACTTGAGCTTCATCGCAAAGTGAATTACATAGCAACCTTCAATTCTCAAGTTGAGGAGAGGAAAGTACCGAACATGTTCTATTTCGTAAAAGCAGAAAACCACTCAAGAAAACTGATCACCACCGTGGTTTCTGGCATGACTGCTCTTCGTCTTCACATGTTATGTGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAAATGGGCTGTGAAATGATGCAAGTTGATAACATGGCTGTGAAGGCTTTAGCTCCATACATGAAGAAGTTCATGGTGATGGTTACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGAATGGGGCAAATGATACCGGATTTGAGTAAGGAAGTGGCTCATTTGGCTGGCTCTTCACTACTCTTTGGTGCAGCGGGGGCAACTGCAGCTGGTGTTGTAGGGGCTGCTGCTATCGGACGTAGAAACAGGTCCACGGAAGGTTCGAGGGGCATTCAACAAGACATGAAAGAAGCACAACAATGGATGGTTGATTTCTTAAGAGAAAGAAGGTGCTCCACGGGGAAGGATATTGCAGAGAAGTTCGGACTGTGGCGAGTACGGTACAGAGACAATGGTCAGATTGCATGGATCTGTAGGAGGCACATGTACGCCAGATCTGCAGAGATAATTGAAGTGCCTATATGA 4143 0.4053 MSSNHNLKDLQWFLQTITMENQNLHSISFYLSQPTSHCYQETNNSININISKENHHHFSNLLTSLASSSNNTNPTLRNLEFHIVEWESQQVKNLGTLLNNHQTIKQIIFKRNRFNGKTMLDLSEILRENKVIKEIMFSESCIGSIGAELIASSLMVNHSLEELQIWEDSIGSRGAEEISKMIEVNPSLKLLTIFDSSFIAATPLISSVLARNRAMEVHVWSGELNGERSSKVVEFVPGNNTLRIYKLNLSGTCRVACSLGMNLTVKYLDMTGVKIKSKCAKEFRWVLEQNQSLKEVNFSRTSLKDKGVVYIAAGLFKNHSLQKLYLTGNLFGGIGVEHLLCPLSRFSSLQMQANISLKCVTFGGGGTRIGRDGLAAITRFLMTNETVTRFGIHDDESLRPDDFVKIFKSLEKNASLKCLSLLGCKGVQGETLLEIIMETLQINPWIEEVDLSRTPLHNSGKTIGIYQRLGQNENPEPEIDLIKDMPLTEPKSCRVFFCGQEYAGKTTLCQSISQNFSASPALPYLDQVRTIVNPVEQAMKTVGMKIKTFKDEDTKISIWNLAGQQEFFSLHDLMFPGHGSASIFIIILSLFRKPSNREPKSTAEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQSSQNLQQTVDLIQRLRDKFQGYVEFYPTVFTVDARSSASVCKLTHHIRKTCKTILQRVPRVYQLCNELMQILSEWRSENYNKPAMKWKEFGDLCQVKVPYLRIRSRHYNKEAVEVKRKAIATCLHHIGEVIYFDELEFLILDCEWFCGEVLGQLLKLNVKKQHSSENNGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDQNSLLLIPSILEEGRGKPQRWQISSPDCLYAGRYLECDDSSHMFLTPGFFPRLQVHLHNRIKSLMNQHGATYSLEKYLISISINGIYIRVELAGQLGYYINILACSTKNLTETLRVIQQLIIPAIQSVCHGITMTENIIRPECVRNLTPPRYRRTQVASLQQLKQALLSLPADSMYDYQHTWSSVLDSGRPILQEGFDFARDLLSDDDFREVLHRRYHDLHNLAQELQIPPESNTEGQNQAVTLSNEAEKVEPSFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGMRYYEHRLLLELHRKVNYIATFNSQVEERKVPNMFYFVKAENHSRKLITTVVSGMTALRLHMLCEFRGQMHVVEDQMGCEMMQVDNMAVKALAPYMKKFMVMVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSLLFGAAGATAAGVVGAAAIGRRNRSTEGSRGIQQDMKEAQQWMVDFLRERRCSTGKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEIIEVPI 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01018 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 681 IPR027417 -
Vifa2g01018 1380 Coils Coil 642 662 - -
Vifa2g01018 1380 Gene3D Ribonuclease Inhibitor 356 473 IPR032675 -
Vifa2g01018 1380 Gene3D Ribonuclease Inhibitor 39 218 IPR032675 -
Vifa2g01018 1380 Pfam Ras of Complex, Roc, domain of DAPkinase 494 622 - -
Vifa2g01018 1380 Pfam Leucine Rich repeat 317 339 IPR001611 GO:0005515
Vifa2g01018 1380 Gene3D - 492 698 IPR027417 -
Vifa2g01018 1380 Coils Coil 1127 1147 - -
Vifa2g01018 1380 Pfam C-terminal of Roc, COR, domain 759 928 IPR032171 -
Vifa2g01018 1380 SUPERFAMILY RNI-like 56 460 - -
Vifa2g01018 1380 PANTHER PROTEIN TORNADO 1 1 1379 - -
Vifa2g01018 1380 SMART LRR_RI_2 157 184 - -
Vifa2g01018 1380 SMART LRR_RI_2 318 345 - -
Vifa2g01018 1380 SMART LRR_RI_2 290 317 - -
Vifa2g01018 1380 Gene3D Ribonuclease Inhibitor 238 355 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01018 - - mtr:11444833 2459.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01018 2 277061782 277066142 Vifa2g01018 2 277061782 277066142 ECH