Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01005 ATGGCTCTTCCTCATCTACTTCTTCTGCTTAGTCTTCATTGCTCATTGTTTGTAGCATTGGTATCTGGTTGGAAGACATTGCAAGGATCACCACCAGTGGTAATAGCACGCGGCGGATTTTCGGGGTTATTTCCAGATTCTAGTTTACTTTCCTATAACTTGGCACTAAAAACTATTTCCCCAAATGTGACTCTATGGTGTGACTTGCAACTGACAAAGGATGGAGTTGGGATATGTTTTCCAGACATCAAGCTTGACAATGCCACTGACATTATCGCTGTTTACCCCGACAAAGCTAAGGATTACTTGATTAATAAGGTTCCAACTCGCGGATGGTTTTCTGTTGATTACAGTTTCAATGAACTAGCTAACGTCTCACTTGTTCAGGGAGTGTTTTCTCGAACGCCATCGTTTGACGGACGTAAGTCTCACATTCTCCGCGTCGAAAATGTAGCTAAATTAGTTAAATCTCCATCTACAGGCCTATGGTTAAACGTTCAGCATGATAGATTCTACAAGCATCATAATTTGAGTGTAGAGAAATTTCTTCACTCACTTTCAACTAAACAAGTATCTATCAGTTACATCTCATCGCCAAACGCAGATTTCTTAAGAAGAGTAAGATCAAACTCAGGTCTTAAAAAAACCGTCACAATCTTTAGGTTTCTAGAGCTACATGAAATTGAACCTACAACCAACAAAACTTATGGTGCACTCCTGAAAAACCTCGAATTTATCAGAACATTTGCTTCGGGAATTCTTGTTCCTAAAGGCTATATATGGCCTGTAGACTCGGAGCTTTATCTACATAAACATACTTCTCTTGTCTCAGATGCTCATAAACAAGGGCTGAAAGTTTTTGTTTCAGACATTGTTAATGATGTTACATTCAGCTACAATTTCAGCTATGATCCTTTGGCTGAATGTTTGTCTTTTATCGACAACGGTGACTTCTCTGTCGACGGCATTCTGTCTGATTTCCCAGTAACTCCATCTGTAGCCATAAATTGCTTTCCCGGTGTACGAAGAAATTCCAAAAAACAAGTTGATACTTTGATTATATCGAAGTATGGAGCAAGTGGAGACTATCCTGCATGTACCGATCTTGCGTATAAGAAAGCGAAATCAGACGGAGCAGATGTAATTGATTGTCCTGTTCAAATCTCGAAAGATGGAATACCCTTTTGCTTAAGTTCTATAGATCTTTCAACGACCACAAATGTGGCTCAAACGAAATTCCGAACTCGCAAAACTATTATTCCAGAGATTCAAAAGGGCAGTGGCATATATACATTTAGCTTGACATGGAACGAAATCAAAACATTGACTCCCTCAATATTGAAACCTTATGAGAAATACCTATTGTTCCGGAACCCAAAATTCAAAAATCAAGGAAAATTCGTAACCTTGTCTGAGTTTTTGTCCTTGGCTAAAGGCTCTGGCGTTTTGATCAACATAGAGAATGCTGCCTACCTTGCATCGAAGCGGGGACTAAGTGTGACAAAAGCAGTCCTTAACGCTCTACAAAAGGCTGGTTACGATAAACCGAGATCTCCTAAAGTTATGATCCAATCAACGCACAGTTCGGTACTAAAGGTATTCAAGGATAAATCCAAATACGAAAGGGTTTACAAAGTTGACGAAAATATCCATGATGCCGATGATAAAGCTATAGAGGATATCAAAACATTTGCTGATTCTGTTGTGGTGAAAAAAGCTTCTGTCTTTACTCAAAATGCAGCATTTCTTGTTAACTCTACAACTACCGTAGCAAGGTTTCATTCATTTAAGCTACCAGTTTATGTCGAAACATTCAGCAATGAGTTTGTATCTCAAGCATGGGATTACTACTCAGATGCGTTTTTCGAGATTAATTCATTTGTTATTGGAGTCAAGGTTAATGGCATTATTACCGACTTCCCTAAGACCGCTGCGCGATATACGAGGAACAGGTGTTTAAAGCATGGCAAAAAAGCACCATATGTGAACCCTATTGAACCTGGAAAACTTTTAAGACAAATTTCCAAGTCATCCCATTTAACACCTTCCCCTCCACTTCCAGTCTTACATGATAGTAATGTCACAGAGCCACATTTGCCAAGTGTTTCTGGAACATTTCCGATTTTCGGTGCTGCTCGTTGA 2142 0.3931 MALPHLLLLLSLHCSLFVALVSGWKTLQGSPPVVIARGGFSGLFPDSSLLSYNLALKTISPNVTLWCDLQLTKDGVGICFPDIKLDNATDIIAVYPDKAKDYLINKVPTRGWFSVDYSFNELANVSLVQGVFSRTPSFDGRKSHILRVENVAKLVKSPSTGLWLNVQHDRFYKHHNLSVEKFLHSLSTKQVSISYISSPNADFLRRVRSNSGLKKTVTIFRFLELHEIEPTTNKTYGALLKNLEFIRTFASGILVPKGYIWPVDSELYLHKHTSLVSDAHKQGLKVFVSDIVNDVTFSYNFSYDPLAECLSFIDNGDFSVDGILSDFPVTPSVAINCFPGVRRNSKKQVDTLIISKYGASGDYPACTDLAYKKAKSDGADVIDCPVQISKDGIPFCLSSIDLSTTTNVAQTKFRTRKTIIPEIQKGSGIYTFSLTWNEIKTLTPSILKPYEKYLLFRNPKFKNQGKFVTLSEFLSLAKGSGVLINIENAAYLASKRGLSVTKAVLNALQKAGYDKPRSPKVMIQSTHSSVLKVFKDKSKYERVYKVDENIHDADDKAIEDIKTFADSVVVKKASVFTQNAAFLVNSTTTVARFHSFKLPVYVETFSNEFVSQAWDYYSDAFFEINSFVIGVKVNGIITDFPKTAARYTRNRCLKHGKKAPYVNPIEPGKLLRQISKSSHLTPSPPLPVLHDSNVTEPHLPSVSGTFPIFGAAR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01005 713 CDD GDPD_SHV3_repeat_1 32 334 - -
Vifa2g01005 713 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 349 648 - -
Vifa2g01005 713 SUPERFAMILY PLC-like phosphodiesterases 31 330 IPR017946 GO:0006629|GO:0008081
Vifa2g01005 713 ProSiteProfiles GP-PDE domain profile. 32 335 IPR030395 GO:0006629|GO:0008081
Vifa2g01005 713 SUPERFAMILY PLC-like phosphodiesterases 351 647 IPR017946 GO:0006629|GO:0008081
Vifa2g01005 713 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 30 334 - -
Vifa2g01005 713 Gene3D Phosphatidylinositol (PI) phosphodiesterase 350 648 IPR017946 GO:0006629|GO:0008081
Vifa2g01005 713 Gene3D Phosphatidylinositol (PI) phosphodiesterase 31 332 IPR017946 GO:0006629|GO:0008081
Vifa2g01005 713 ProSiteProfiles GP-PDE domain profile. 351 648 IPR030395 GO:0006629|GO:0008081
Vifa2g01005 713 Pfam Glycerophosphoryl diester phosphodiesterase family 358 643 IPR030395 GO:0006629|GO:0008081
Vifa2g01005 713 Pfam Glycerophosphoryl diester phosphodiesterase family 39 294 IPR030395 GO:0006629|GO:0008081
Vifa2g01005 713 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 8 703 - -
Vifa2g01005 713 CDD GDPD_SHV3_repeat_2 352 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01005 Vifa-Chr2 274003858 274007740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01005 22 707 Receptor kinase-like Gene Family AT4G26690 55.652 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01005 - - tpra:123914082 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01005 2 274003858 274007740 Vifa2g01005 2 274003858 274007740 ECH