Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00928 ATGGTTAAGGGTTTGCACAGCCAAAACCTCCCCGCCGATGTAGCACACGTCGTCGATCAGCTAGAGCGCCACTGCTTGGCTCCCGATGGATCTCTCATCTCCAAGCCTCTCTACAACGATCTCCAACTCGCTAGAGAGGAAATGTGCAGGGAAAGACTTCGATATCTCGAAGCCATGGCTATATATTCTGAGGCTATTGCAATGGTGGAAGAGTATCATCAAGCCATTTCTGTGTCTAGCATCGGTGGAATGAGAGATACTGGAGGTCTTTATCCGCAGTTCGGATTGAGGAACTCTCCTCAGGTTTATCAGACATTAGAACATCAAATGATTGTCGCTGAAGCGGCTCAGCGATTGAGACTACCTCTTATTTCCAAAGATGGAGAAGTTCATGATGAAGAAATTGAAAAGCTAAGTGTAGTATCTCGAAGCTCCCTTGACAGTAATAGCACTAGTGCTGTGAACAACCCGAGCTTGAGTTCTTCTAATTATGCCACTCCAAACAGCTCTGTTAGTGGGGTTAATTATTCTCTTGCTTCTATGGATCAAGTAGACCCTGTAGTTGGTGGTGTTCCCAATCGTTTTCTTGGAATTACACCGGCTTATTTGTGGCAGACTCAGCATCTGAAAACGCCATTATCTGTGGATATGACAGAATATCGTATGTCTCTCTCACGGGAGGTAGATGCTCGCTTGAAAATGAAATGTGATAAGTTATCAGATGCGTTTGTATTGGAAGACAACGATTCATCATCATTTGGAAGTCAAAGTTCAACTTCACGGCTTCCAGAAAGAGTGAAGTTGTTGATTGAGGAGATCGAAAGAGAAGAAGCAGCACTGAGGGATGACCTTTATTCTGCTGATAGAAAATTTGCTGAATATTATTCTGTACTGGAACAGATACTTGGGGTGCTCATTACACTTGTCAAAGATTTGAAGTTGGACCATCAACATAAATATGATGAGATGCAGAAAACATGGCTCTGTAAAAGATGTCAGACCATGAGCGCAAAATTGAGCGTTTTAGAAAATGTTCTTCTCCTCGGAACTTACACTAAGGAGTCTATACCCGCCCTTCATAAGATAAGGAAGTATCTCGTCGAGGCTACTGAAGAGGCTTCTATTGCATATAATAAAGCGGTTACTCGACTGCGTGAGTACCAGGGTGTCGATCCTCACTTTGACGACATTGCGAGCCAGTACCACGACATTGTAAAGAAATTGGAAAACATGCAATGGACAATAGACCAAGTTGAGATGGATCTGAAACGCATGTCAGATAGTTCTACCTCATAG 1296 0.4321 MVKGLHSQNLPADVAHVVDQLERHCLAPDGSLISKPLYNDLQLAREEMCRERLRYLEAMAIYSEAIAMVEEYHQAISVSSIGGMRDTGGLYPQFGLRNSPQVYQTLEHQMIVAEAAQRLRLPLISKDGEVHDEEIEKLSVVSRSSLDSNSTSAVNNPSLSSSNYATPNSSVSGVNYSLASMDQVDPVVGGVPNRFLGITPAYLWQTQHLKTPLSVDMTEYRMSLSREVDARLKMKCDKLSDAFVLEDNDSSSFGSQSSTSRLPERVKLLIEEIEREEAALRDDLYSADRKFAEYYSVLEQILGVLITLVKDLKLDHQHKYDEMQKTWLCKRCQTMSAKLSVLENVLLLGTYTKESIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDDIASQYHDIVKKLENMQWTIDQVEMDLKRMSDSSTS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00928 431 Coils Coil 270 290 - -
Vifa2g00928 431 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 3 423 IPR029327 GO:0051225|GO:0070652
Vifa2g00928 431 Pfam HAUS augmin-like complex subunit 4 183 420 IPR029327 GO:0051225|GO:0070652
Vifa2g00928 431 MobiDBLite consensus disorder prediction 146 166 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00928 K16587 - gmx:100786070 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00928 2 246803407 246808520 Vifa2g00928 2 246803407 246808520 ECH