Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00915 ATGGGTTACAGAAACAAGAGCTTGGTGACAAAGGATCAAACTGTTTCTTCATCATCGAATTGTGAATCACCGAGTGATGCAATGCTTGTTTTCACTATGAATATCATTGGTTTACCAGTTGATGTTCATGTTAAAGATGGTTCTGTGTATTCTGGAATCTTCTATACTGCTTCTGTTCATGACCGTTTCGGTATTGTTTTGAAGCAAGCTAGGATGACCAAGAAGGGAAATGGCCACAGCAATGTTGGAAAAGAGGCCTTGATAGATACATTAGTGGTTCAATCAAAGGATATTGTGCAGGTCATTGCTAAGGGAGAAACACTTCCCGGGGATGGTGATAATGGAAAAATAACTGGCGAGGATGAGGAAGCAATTACACCCAAAGTTTGTTGTTCCGATAACCGTTCAGTGGATGCAGAACAGGTTAATCAATCAAGACAAGCTGAAGATAACAACTCACAAGAGAAGACTGATGACTGCAGGCAGAAGTTTGAATTTCATAGTGAAAAAAACGATGAAAAGATTCAAAGCCTTGACTCAGGCCATAAAATTGTTACATGTCTTAGCCAAGTTAAAGCTGATAAAGCCAATGATCAGGGTAGTGAAAGGTCCACTTCACCAGATTCTACATCTACACATTCCACCCTAAGTGAAGATCTCAGCGAGGCGTCACATAATGTTCCAGCAAAAATTATTGAAAAATCTGCTCCAAGGGGTACAGATTGTACTAGAAATGCAAAGGAATTTAAGCTCAACCCAGCGGCCAAGATTTTCTCCCCGTCTTTTGTATATCCTATTTCAGCACCTTCTGCTATGCCAACATCTGCAAACATGGTATACATGCCAAATAGCCCTCATGCTCCAAATATGGTTTACATGCCAAATAGCTCTCCTCCAGTACATGTTGCTACTCTTCAACCTGAAGTCGGATTCAATACTTTTGCTTCTCGACCTTCTGTGCCTGTTAAGGCTTTACAGTATGGTAATTTGACAGTTGGAAATGCTGGCAGTGGTTCTCAATTTTCACAACCTATTGTTGGTCAACTGGCACATAGGACACAACCTCTTCAGTATGCTGCACATTATACTCCAGTTCTATCTGAACCTGCTTATTTGCAATCAAGCTCTCCTGCTGTTATGGCTGGACGATCCACCCAGCTAGTCTATGTTCAACAAGTTTCCCACGATTTGGTTCATGGTGTAACGGCTCCATTCCCAACCCGCCCCCTGATGAATCACGTACAATTTCCAAAGCATCAAGGAGGAACATTTAGTCAAGCAATACCAGTTGTTATGCCTCCATCTGTCCTAACAAGCGCGCAACAACAAAACTTTGCATTTCAAAACCACATTCCAGTTTTACAACCTGGCTTTTCTCCACCTAGACCTATTTCAGTCCCAGGATCAAATGGTTTCTATGGCACCAAGTTTTCATGA 1437 0.4168 MGYRNKSLVTKDQTVSSSSNCESPSDAMLVFTMNIIGLPVDVHVKDGSVYSGIFYTASVHDRFGIVLKQARMTKKGNGHSNVGKEALIDTLVVQSKDIVQVIAKGETLPGDGDNGKITGEDEEAITPKVCCSDNRSVDAEQVNQSRQAEDNNSQEKTDDCRQKFEFHSEKNDEKIQSLDSGHKIVTCLSQVKADKANDQGSERSTSPDSTSTHSTLSEDLSEASHNVPAKIIEKSAPRGTDCTRNAKEFKLNPAAKIFSPSFVYPISAPSAMPTSANMVYMPNSPHAPNMVYMPNSSPPVHVATLQPEVGFNTFASRPSVPVKALQYGNLTVGNAGSGSQFSQPIVGQLAHRTQPLQYAAHYTPVLSEPAYLQSSSPAVMAGRSTQLVYVQQVSHDLVHGVTAPFPTRPLMNHVQFPKHQGGTFSQAIPVVMPPSVLTSAQQQNFAFQNHIPVLQPGFSPPRPISVPGSNGFYGTKFS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00915 478 MobiDBLite consensus disorder prediction 136 150 - -
Vifa2g00915 478 MobiDBLite consensus disorder prediction 202 222 - -
Vifa2g00915 478 MobiDBLite consensus disorder prediction 127 160 - -
Vifa2g00915 478 Pfam Ataxin 2 SM domain 26 104 IPR025852 -
Vifa2g00915 478 MobiDBLite consensus disorder prediction 1 22 - -
Vifa2g00915 478 MobiDBLite consensus disorder prediction 7 22 - -
Vifa2g00915 478 ProSiteProfiles Sm domain profile. 27 107 IPR047575 GO:0003723
Vifa2g00915 478 MobiDBLite consensus disorder prediction 194 243 - -
Vifa2g00915 478 PANTHER ATAXIN 2-RELATED 150 438 IPR045117 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00915 Vifa-Chr2 242650431 242661240 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00915 - - psat:127084933 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00915 2 242650431 242661240 Vifa2g00915 2 242650431 242661240 ECH