Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00912 ATGATGAAGGAACACCTTTCCACCTTTCGTTCTCAGCTTGAAGATTTTGCTCGCAAGCATAAGAATGACATCCGCAAGAACCCTGCATTCAGATCACAGTTTCATGAGATGTGTGCTAAGGAACTGTGTAATCTCCTTCGCCAGAGACGAAAAAGTGACAGAGGAGTTGTTTCCGAAGATGATTGCCTGCGCGCTATCAGTAAACTGAAGGTTCTAGGCAGCGGGTTTGAAGTTATTTCTGTTGGAAAGAAAAAACTTGTTCGTTCTGTTCCAACTGAGCTGAACAAAGACCATAACGAAATTCTAGAACTTGCCCAGGGTCAAGGGTTTGTGACGGTAGATCAAGTAGAACGGCGGCTATCTTGGACTTCGGGTCGTGCCATTGATGCACTTGATACATTACTTGATGACGGGCTTGCAATGATTGATGATGGCCACAAAGATGGAAAACGGCGGTACTGGTTTCCGTGTGTATCACCCATTTCATCTTTGACAGGAACCGATTCCTTGTAA 513 0.4483 MMKEHLSTFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKELCNLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHNEILELAQGQGFVTVDQVERRLSWTSGRAIDALDTLLDDGLAMIDDGHKDGKRRYWFPCVSPISSLTGTDSL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00912 170 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 2 40 IPR016689 GO:0000814|GO:0071985
Vifa2g00912 170 Gene3D - 91 168 IPR036388 -
Vifa2g00912 170 SUPERFAMILY "Winged helix" DNA-binding domain 94 157 IPR036390 -
Vifa2g00912 170 Gene3D - 1 50 - -
Vifa2g00912 170 Pfam EAP30/Vps36 family 2 39 IPR040608 -
Vifa2g00912 170 Pfam EAP30/Vps36 family 40 144 IPR040608 -
Vifa2g00912 170 SUPERFAMILY "Winged helix" DNA-binding domain 2 93 IPR036390 -
Vifa2g00912 170 FunFam Vacuolar protein sorting-associated protein 91 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00912 Vifa-Chr2 241814078 241816689 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00912 K12188 - gmx:100781799 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00912 2 241814078 241816689 Vifa2g00912 2 241814078 241816689 ECH