Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00888 ATGGAAGTGAGGCAAGATTTCATGCTTTCACCTGCTGGTGATAGTGAACCAACTTTCAGAACTGCACATTTTCTCAAACCTATTGAAAACTCCATTCACGAGTTTAGCCTTAACCCTTCATCTTCATCATCTGTTTCTGAACCAAACGGATGCCCTTTGAAAATCAACTTCAATGGCTGGCGCTATCCACAGACAAAATGGGTTAAGTGGGTTGATCAACTTAAGCCCAGGTATGAATCAGTTTGGAGAAAAGCTGGAATCTTTGAATCTATAATGAGTACTAAGAGCCGCATTACTAAAAATCAAGACTTGCTTTATGGGGTTGCTGAGAAATGGTGTTGTCAGACAAATACCTTTGTGTTTCCCTTTGGTGAAGCAACTATCACTTTGGAGGATGTTATGGTTTTGGGTGGTTACTCTATTCTTGGCGAACCTGTTTTTACACCACTTGAAGATCCAGAAATGAGAGAGGTGGAAAAGAAGCTCCAACACATTGAAAGACAGGAGAGGATTATAAAACGTATGGCTCCTTCAACATCTGTCTGGATGAATATTTTCATTAATAAAGGGAGTGAAATTGAGCATGAAGCATTTCTTGTTACTTGGTTGTCAATTTTTGTTTTTCCTCACAAATACAACCTAGTGAAAAGTTGTTTGTTTCCTATTGCTATTCATCTTGCTAGAGGGGATCCTATTGCTTTGGCACCTGCTGTTTTGGCTAGCTTATATAACGATTTGACTTTGTTTAAGGAAATAATTGTAGGTTTTAAGAAATGTTTATTACGAGGTGTTGAACTTCCTTTGGTGTTGGAGGTTGATGTACAATCACCATTTTACTTGGTTCAAGTTTGGGTGTGGGAGAGGTTCAAAAATTTGCAACCACAACCTAACTTGATCGACAATGAACACCATGTGTTGTCGAGGTGGCATATGGTTAGGGCTTTGAAAATTGACAATGTGAGATTCGCATTGGAATCAGCTATAGATGATTTTCTTTGGCGTCCATATGTTAGATATGCTGATAAGTGTGGAATGTTTTATCCAAATGATGAAATTTTGGTACCATTTATGGAAGTTTTGGATAAAAAAATGCTCTCATTTGTTCTATGCTTGAGAGCTTCTGAGCTTGTTGGAATTGAATGTATAGAGCAATATCTACCACATAGAGTTGCTATGCAATTTGGAATGGATCAAGATGTTCCTGGCTATGTGTCTAGATTCAATGAGACTAAAGAGCTTGCTTGGAAAAATTACACCAGAACCTCATCGGATACAAGTTTATATTTTCCATCTAGATTTTTTGAGGCTGATGTTACCACGCGTTATGCAAAGTGGTGGAAAAAATCAATATTGGGTCTTCAGGGTTTCAATAAGAACGTTGTGCGGCGTAAGAGAAGTGCGAGGTTATTGATATTTAGACCTGATCATTCTGCTTTGTTTCCCCCTCCTAAACTTGTTGACGATGATGTTCCTAAAGTTTTGAAAACCATGTCATCTGAAAATTCTGCTGAAGATGGTTTGAAAGATGAGAAAAATGCTGATGCTCCATCAAGTCTACCACCAGAACATAACACTTTGACTCCTTTGATATCTGCTGTTGAGGATTGTAAGACTGTGTCGGAAGATGATAAGCTTCAAGATGGAAATTCTCTTAAAGATGGTCTGGAATCTGAGAAATTTGATGCCGATGCTGATGCTACTTCAAGTCTACCACAAGAACATAACACTCTGATTCCTTTAATATCTGTTGAAGTTTTTAAGACTGTGCTGGAAGATGGTGAGTTTAAAGATGCAAATGAAAGCAAAGAAGCTGGGTTGTCAAGTGAGAGAATATGCGAACCAGAGACTCAAGGTGGGAGCTATAGCTATTTATCTGATGCGAGCATAGCGAAACTTGAAGAGAGAATTAGCCGACTCGAGAAACTTCATAGAGAATTGAAGATGCCAAGGTTCCTGGTGTGA 1962 0.3858 MEVRQDFMLSPAGDSEPTFRTAHFLKPIENSIHEFSLNPSSSSSVSEPNGCPLKINFNGWRYPQTKWVKWVDQLKPRYESVWRKAGIFESIMSTKSRITKNQDLLYGVAEKWCCQTNTFVFPFGEATITLEDVMVLGGYSILGEPVFTPLEDPEMREVEKKLQHIERQERIIKRMAPSTSVWMNIFINKGSEIEHEAFLVTWLSIFVFPHKYNLVKSCLFPIAIHLARGDPIALAPAVLASLYNDLTLFKEIIVGFKKCLLRGVELPLVLEVDVQSPFYLVQVWVWERFKNLQPQPNLIDNEHHVLSRWHMVRALKIDNVRFALESAIDDFLWRPYVRYADKCGMFYPNDEILVPFMEVLDKKMLSFVLCLRASELVGIECIEQYLPHRVAMQFGMDQDVPGYVSRFNETKELAWKNYTRTSSDTSLYFPSRFFEADVTTRYAKWWKKSILGLQGFNKNVVRRKRSARLLIFRPDHSALFPPPKLVDDDVPKVLKTMSSENSAEDGLKDEKNADAPSSLPPEHNTLTPLISAVEDCKTVSEDDKLQDGNSLKDGLESEKFDADADATSSLPQEHNTLIPLISVEVFKTVLEDGEFKDANESKEAGLSSERICEPETQGGSYSYLSDASIAKLEERISRLEKLHRELKMPRFLV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00888 653 MobiDBLite consensus disorder prediction 498 525 - -
Vifa2g00888 653 MobiDBLite consensus disorder prediction 502 516 - -
Vifa2g00888 653 Coils Coil 155 175 - -
Vifa2g00888 653 Pfam Plant mobile domain 86 447 IPR019557 -
Vifa2g00888 653 PANTHER PROTEIN MAIN-LIKE 2 50 452 IPR044824 GO:0010073|GO:0048507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00888 Vifa-Chr2 233409061 233412483 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00888 - - tpra:123915246 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00888 2 233409061 233412483 Vifa2g00888 2 233409061 233412483 ECH