Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00880 ATGAAGAACACAAAACCTCAAAACCAACCAACCTCTTCTTCAAGATCTTCATCAGTCTCAACCCATTTACAAATGGTTGAACTCAAACACAAGATCTTAACCTCCCTCTCCAAACTCTCCGACAGAGATACCCACCAAATAGCCGTCGAAGATCTCGAAAAGACCATTCTAACCCTCTCCCCCGACGCCATTCCCATGATCCTTAACTGTCTATACGACGCCGTTTCCGACCCCAAACCCTCTACAAAAAACGAATCCCTCCGATTATTATCCTTCGTTTGCTCCTCCCACCAACACTCCGTTACACCTCACCTCACTAAAATCATCTCCCATATAGTCCGACGACTTAAAGACACCGATTCGGCTTCGCGCGATGCGTGCCGAGACTCGATTGGATCGATTGCCGCTCTTTATTTGAGAGGAGAGAATAATGGTAATGGGAGTGGCGGTACTGGTTCGCTTGTTGGCTTGTTTGTTAAGCCGTTGTTTGAGGCAATGGGGGAACAGAATAAAGCTGTTCAGGCTGGGGCGGCTGTTTGTATGGCCAACATAGTTGAATCTACGGCTGCTGTCAATCATGGTGCTGGTGATGTGGTTCTGCCGGTGGGGGCGTTTCAGAAGATGTGCCCTAGGATCTGCAAGCTCATTAATAACCCTAATTTCTTGGCGAAGGCTTCCATTTTGCCTGTGGTGGCTGCATTGTCTCAGGCTGGGGCAATTGCACCACAAAGCTTGGATAATTTGCTATCTAGCATTCATGATTGCCTCTCCAGTAGTGATTGGGCAACACGCAAAGCAGCAGCAGAAGCATTAAGTTCTTTGGCTTTGCATTCAAGCAGTTTGATTACTGATAAAACGGCGCCTACAGTTGCATTGCTCGAGACTTGTCGGTGTGACAAGATAAGACCTGTGAGGGATAGCATGACAGAGGCATTGCAGTTGTGGACAAAAATTGCAGGGAAAGAAGATGGATCTTCTCATGATTCAAAGCCTTTGTCGTCTGATGGTGGGAATCCTGAACCAGCTGTTTTGTCAGAAACAAGTGACCTGAAAAAGGTAAATTCTGATGAGAGGAAGACTGATCCATCAGTAAAAGATATACCAACCAGTTCTTCTAACACGGATTTGAATTCTAAAGCCAAAGCGGCTAGTGTCTCTGAGAAGGCAGTTGTAATATTAAAAAAGAAACCACCTGTCTTAACTGATAAAGTACTAAACCCAGAATTTTTCCAAAACCTTGAGAAAAGGAGCTCCGATGATTTACCAGTGGAAGTGGTTGTTCCTCGCAGATCCCTCAATTCTTCATCCTCAAACAACGAGGAAGAGTCAGAGGCAAGTGCTAAAGATTTAAACGAAAGAAGGAATCCCGTTGGAAATGTCCCTAATGATGGCTTTCATCGATCTGTCAACAATAAATATCATGGTTTAGAAAGAGGAAATGATGGGAATTCAAGACAAAGAAATTATGACGACTTTGCCCATGACAGATACTCTGAGAGGAGAATGAATGCGAAAGAACTAAGGACAAAACCAAACGATTCAAATGACAGGACTGAAAATGATCAGAGAGAGGGTTCCTCCAATATTGCAGGTTTTTCTAGAGCTGATGGTCAATCAGAAGTACCCTTCTCCAATAATAGAGGAAACTTGTTGGCCATCCAGAGACAGTTAACACAGCTTGAAAGACAACAGGTTCATCTGATGAACATGCTGCAGGATTTCATGGGTGGATCTCATGATAGCATGGTGACTCTAGAGAACAGAGTACGAGGTCTTGAGAGAATTGTTGAAGACATGTTACAAGATTTATCTATATCATCAGGCCGTAGATTTGAGGGATCATCCACTCGGCCTTCTAGCAAATATAATGGTTTTAATGATTATTCCAATGCCAAGTATGGAAGAGGTGGTGATGGACGCATCCCATATAATGAAAGGTATACCCAAACTGATGGGAATGCTTTGGGGATGAGGGGAAGAGGGCCATCTTGGAGATCTGACATGCCCGAGGGTTGGGATTTTCCTGGGTATGGTGCTTCTAGAAATGGCCAGATTTCCTCAAGGAGGGCTTTTGGTGGTAGTTCTGTTGATGGAAGATCCCCAAATTCAATGCATGAGAGTGATCAAGGTGGCAGCAGGAGAGCTTGGGATAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGGCCCTCTGCAAGAAGTGTTTGGCAAGCTTCTAAAGATGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGTGAGGACAATGGACCATCTAGAGCAACAAGAGTAGCAATCCCTGAAATGACTGCAGAAGCTCTGGCTGATGAAAGTGTTGGACAAGAGAGGGATGCAATCTGGACTTCCTGGAGTAATGCAAATGACGCCCTTCAAGCAGGTGACATAGATTCGGCCTTTGCTGAGGTGTTGACTACTGGAGATGATCGTTTGCTTGTAAAACTAATGGATAGAACAGGCCCTGTAATTAATGAACTTTCAAATGACATTGCATGTGAGATCTTGTATGCCATCGGACAACTCTTACTGGAGCAGGACCTGTTTAACATCTGTTTGTCTTGGATTCAACAGTTGGTAGAGGTATTATTCGAAAACGGCCCAGACACTTTTGGCGTTCCCATGGAAGTGAAGGAAGAGCTCTTGCGGAATTTACACGACGCTTCAACAGATACAGCTGAGGGCTGGGAAGGTGTTCCTCCAGATCAACTTTTATTGCAGTTGGCATCAGGCTGGGAAATTGATCTACAACAACCTGACAAATAG 2775 0.4483 MKNTKPQNQPTSSSRSSSVSTHLQMVELKHKILTSLSKLSDRDTHQIAVEDLEKTILTLSPDAIPMILNCLYDAVSDPKPSTKNESLRLLSFVCSSHQHSVTPHLTKIISHIVRRLKDTDSASRDACRDSIGSIAALYLRGENNGNGSGGTGSLVGLFVKPLFEAMGEQNKAVQAGAAVCMANIVESTAAVNHGAGDVVLPVGAFQKMCPRICKLINNPNFLAKASILPVVAALSQAGAIAPQSLDNLLSSIHDCLSSSDWATRKAAAEALSSLALHSSSLITDKTAPTVALLETCRCDKIRPVRDSMTEALQLWTKIAGKEDGSSHDSKPLSSDGGNPEPAVLSETSDLKKVNSDERKTDPSVKDIPTSSSNTDLNSKAKAASVSEKAVVILKKKPPVLTDKVLNPEFFQNLEKRSSDDLPVEVVVPRRSLNSSSSNNEEESEASAKDLNERRNPVGNVPNDGFHRSVNNKYHGLERGNDGNSRQRNYDDFAHDRYSERRMNAKELRTKPNDSNDRTENDQREGSSNIAGFSRADGQSEVPFSNNRGNLLAIQRQLTQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGRRFEGSSTRPSSKYNGFNDYSNAKYGRGGDGRIPYNERYTQTDGNALGMRGRGPSWRSDMPEGWDFPGYGASRNGQISSRRAFGGSSVDGRSPNSMHESDQGGSRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGPSRATRVAIPEMTAEALADESVGQERDAIWTSWSNANDALQAGDIDSAFAEVLTTGDDRLLVKLMDRTGPVINELSNDIACEILYAIGQLLLEQDLFNICLSWIQQLVEVLFENGPDTFGVPMEVKEELLRNLHDASTDTAEGWEGVPPDQLLLQLASGWEIDLQQPDK 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00880 924 MobiDBLite consensus disorder prediction 524 543 - -
Vifa2g00880 924 MobiDBLite consensus disorder prediction 1 20 - -
Vifa2g00880 924 MobiDBLite consensus disorder prediction 428 543 - -
Vifa2g00880 924 MobiDBLite consensus disorder prediction 675 716 - -
Vifa2g00880 924 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 17 892 IPR033337 GO:0005874|GO:0008017
Vifa2g00880 924 MobiDBLite consensus disorder prediction 365 381 - -
Vifa2g00880 924 SUPERFAMILY ARM repeat 32 861 IPR016024 -
Vifa2g00880 924 Coils Coil 582 602 - -
Vifa2g00880 924 MobiDBLite consensus disorder prediction 319 383 - -
Vifa2g00880 924 MobiDBLite consensus disorder prediction 680 709 - -
Vifa2g00880 924 Gene3D - 148 287 IPR011989 -
Vifa2g00880 924 MobiDBLite consensus disorder prediction 470 523 - -
Vifa2g00880 924 Gene3D - 27 143 IPR011989 -
Vifa2g00880 924 MobiDBLite consensus disorder prediction 350 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00880 Vifa-Chr2 232073288 232080526 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00880 - - gmx:100804845 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00880 2 232073288 232080526 Vifa2g00880 2 232073288 232080526 ECH