Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00819 ATGGCTAGCACCAGCGGAACAAAGGGTCCTTTTGAGATCTCTAGACAACCGTCTAAGAGGATGATAAGGGCACCAACAAGGACTGTTGAGTTGCCAAATGAAGAGAATATTATGGATAGTGAGATTGTTCCTTCTTCACTTGCTGTTCTTGTGCCAATTCTTAGAACTGCCATTGATATTGAAGTGGAGAATCCTAGAGTTGCATATCTTTGTCGCTTTCATGCATTTGAGAAGGCTCATACAATGGATCCAACATCAAGTGGCCGTGGCGTTCGTCAATTCAAAACTTATCTCTTGCACAAGCTCGAAAGGGAAGGGGAGATAACGGAGAAACATACTAAAAGAACTGATGCCAGGGAGCTACAGAGTTACTACCAATATTTCTACGAGACTAGAATCCGGGGTGGTGAATTAACTAAAAAACCGGAGGAGATGGTTAGGAATGTTCAGATTGCCACTGTGTTGTATGAAGTACTGAAGACTTTGGTAACTCCACAAACCATCGAGGAGAAGACAAAAAGATATGCTGCGGATGTTGAGAAAAAGAAGGGACAGTATGAGCATTATAATATCCTTCCATTATATGCTGTTGGTGCTAAACCGGTGATCATGGAACTTCCCGAGATCAAAGCCGCAATTGCTGCTTTAAGTAAGGTGGATAATCTTCCATTGCCTTTGATTCATTCAAGACCTGATAATGATGATTCTACAATGCCTATGGAGAGGGTTAAAAATGTGAATGATATACTCGATTGGATCGCCTCAATTTTTGGGTTTCAGAAAGGAAATGTGGCAAATCAAAGGGAGCACCTTATATTATTACTTGCCAACATGGATATAAGGAACAGGTCTGCATCTTATGAGATCCGTGAAGAAACTGTAGAGAAGTTGATGGCTACAACTTTCAAAAATTATGAATCATGGTGTCAATACGTGCGTTGTAAATCAAATATTAGGTATTCAGATGGTCATGACAAACAACAATTAGACCTGATTTACATTGCACTTTATCTTCTAATTTGGGGAGAAGCTTCAAATATTCGCTTTATGCCTGAATGCCTTTGCTATATTTTCCATCATATGTGCAATGATGTCTATGGGGTTTTATATAGCAATGCCATTCAAGTGAGTGGAGATGCATATCAAATAGTAACACGTGATGATGAACATTTTCTGAGGGAAGTTATAACACCTTTATACGAAGTTTTAATGAAGGAAGCAAAGAGAAGTAACAAAGGCAAAGCAAGTCACACCAATTGGAGAAATTATGATGATCTTAACGAATACTTCTGGTCTGACAAATGTTTTAAGCTAAATTGGCCAATGAATCTCAACTCGGATTTTTTTAGGCATAATGAGACACAAACAGCAAATCAGGGCCGGGGCCGGGGACAAGCCAGCACTGGAGCTGGGAAGAAGAAGCCTAAAACAAATTTTGTTGAAGTTCGTACATATTTGCATCTTTATAGGAGTTTTGATCGAATGTGGATTTTCTTTATATTGGCTTTACAGGCAATGATTATAATTGCTTGGAGTAACTTGGGACTTATTGGAGTGCTTACCGATGATGATGTCTTCAGAAATGTTTCCAGTATATTTATTTCATATGCTATTCTCAATTTTTTTCAAGTAACTATCGATATTATTCTCGTCTGGAATGCATTGAGGAACATGAAGTTTACTCAGTTGCTTCGGTATTTCCTGAAGTTTGTGGTAGCAGCGGTTTGGGTTGTTGTTTTGCCAGTGAGTTTTAGTAGTTCTCTTCAGAATCCAAGCGGTCTTCTAGAATTTTTCACCCACTGGGCTGGGGACTGGGGGCCCGGGTCACTCTATTACTATGTTGTTGCAATATATATGATACCAAACATAGTGGCTGCAATACTATTTTTCCTTCCACCCATGCGGAGAACATTGGAGCGCTCAAATATGCGAATTGTTACCCTTTTAATGTGGTGGGCTCAGCCGAAGTTGTATGTTGGTCGGGGCATGCACGAGAGCATGTTTTCACTGATTAAGTACACCCTCTTCTGGATTATGCTTCTAATTAGCAAGCTAGCATTCAGTTACTATGTCGAGATATCACCCCTTGTTGAACCGACAAAATTGATCATGGCAATGCATATAGATAACTACCAGTGGCATGAAGTCTTTCCAGAGAACGATATTCACAATTTAAGTGTTGTAATTTCAATATGGGCTCCAATTATCCTGGTTTATTTTATGGATACTCAAATATGGTATGCCATTTATGCCACTTTGTTCGGTGGGATTATTGGAGCCTTCAGCCATTTGGGTGAGATAAGGACACTTGGAATGCTCCGCTCCAGATTTCAATCTGTACCACTAGCTTTCAGTGAAAGCTTTTGGACTGGAAGAAACAAAAAGAACATACAAGAGGAATCGGATGATGCATATGAACGGGATAATATTGCATACTTCTCTCAGGTTTGGAATGAGTTTATAAATTCTATGAGAGAAGAAGACCTCATCGGTAACAGGGATAGAGATTTGCTTCTTGTTCCATACAGTTCAGTTGATGTTTCGGTCATCCAGTGGCCTCCATTCTTGCTCGCTAGCAAGATTCCTATAGCTGTCGACATGGCAAAAGATTATAAGAAGGACGATGATGCAGAATTGTTTAGAAAGATTAAGAGTGATGGTTATATGTTCTCAGCAGTTGTTGAATGCTACGAGACTCTCAAGGAAATCATACTGAGCCTTCTCCTAGATGCAGAAGATAGACAGGTTATACAGCTCATATGCTACAAAGTAGAAGAATGCATAGAACATGAAAATTTTGTCAAAGAATTCAAAATGAGTGGTTTGCCTTCACTCAGTGAGAAGTTGGAGAAATTCTTAACTCTATTGCGAGCTGAAGACAACAAGTCTGAGTCTCAGATAGTCAATGTGCTGCAGGATATTGTAGAAATTATCATTCAGGACGTTATGATCGATGGCCACGCAATTCTGCATGCACCTCAGCATCATAATGTTCAGAGTGGACAGCAGCAGAGGTTTGTTCACATTGATACTTCATTTACACAGAAGAGATCGGTGATGGAGAAGGTTATTAGACTTCACTTGCTTTTAACCGTCAAAGAATCCGCTATAAATGTGCCCCAAAATATTGAAGCCCGCCGCCGTATTACATTCTTTGCAAACTCCTTATTTATGAACATGCCAAAGGCTCCTAAAGTTCGGGATATGTTGTCTTTCAGTGTTCTAACACCATATTACAAAGAGAATGTTCAATATTCCAATGATGAACTCAAAAAGGAAAATGAAGATGGAATTTCGATTTTATTCTACCTAACAAAGATATATCCTGATGAATGGGCCAATTTCGATGAGCGCATGAAAAGTGAAAATGTTGACGAAGAAGAAGATAGGGAGGAATATGTTCGTCAGTGGGCATCTTACAGAGGGCAGACACTTTCTCGAACAGTGAGAGGAATGATGTACTATTGGCAAGCCTTACTCCTCCAGTACCTCATAGAAAATTCAGGAGATTATGGTATTTCTGAAGGCTACCGGACTGTGGAAATCAACGACAGAGATAAGAGGCTTCTTGAACAAGCAAAAGCTCTGGCTGATTTAAAGTTCACCTATGTCGTTTCTTGTCAACTGTATGGTTCGCAAAAAAAGTCTAAAGATACTTTTGACCGAAGCTGTTACAATAATATTCTCAATCTGATGGTAACGCATTCAGCGCTTCGTGTTGCATATATAGACGAAACAGAAGACACAAAAGGGGGAAAGAAAGTCTATTACTCTGTGCTTGTCAAGGGAGGGGATAAATATGATGAGGAAATATATCGCATAAAGCTTCCTGGTCCTCCAACCGAAATTGGGGAAGGGAAACCTGAAAACCAAAACCATGCCATTATATTTACTCGCGGAGAAGCTTTACAAACCATAGACATGAACCAGGATAATTACTATGAAGAAGCTTTCAAAATGAGAAATGTATTGGAAGAATTTCACGCGCATAAAGGGCAAAGGAAACCAACTATATTGGGTCTAAGAGAGCATATATTTACAGGAAGTGTTTCATCACTTGCTTGGTTTATGTCGAACCAAGAGACCAGCTTTGTGACCATCGGGCAACGAGTTTTGGCAAATCCTTTAAAGGTTCGATTTCATTATGGCCATCCAGATATATTTGACAGAATCTTCCACATAACAAGAGGTGGCATAAGCAAAGCATCAAAAACTATCAACTTAAGCGAGGATATATTTGCAGGGTACAATTCAACTCTTCGTCAAGGATATATTACGCATCACGAGTACATACAAGTTGGTAAGGGGCGAGATGTTGGCCTGAATCAGATTTCACTCTTTGAGGCTAAGGTTGCAAATGGAAATGGAGAGCAAACACTTTGTCGTGACGTTTATCGTCTCGGCCGAAGATTTGACTTCTTCAGAATGTTGTCGTTCTACTTCACAACAGTTGGGTTCTATTTCAGCAGCATGATAACTGTGCTTACAGTTTACGTGTTCTTATACGGACGTGTATATATGGTATTGAGTGGAGTTGAGAGAGAAATTATTCAAAGTCCGAACATACATCAGAGCAAATCCCTCGAACAAGCCTTGGCATCTCAGTCTGTAGTTCAATTGGGTTTGCTTCTGGTGCTTCCCATGGTTATGGAAATCGGTTTGGAGAAGGGATTTCGCACGGCCTTGGGTGATTTCATCATCATGCAACTTCAGTTAGCCTCTGTGTTCTTTACTTTCCAGCTTGGAACAAAAGCTCATTATTACGGACGAACACTCTTGCACGGAGGCTCTAAATATAGACCAACAGGTCGCGGATTTGTCGTCTTCCATGCAAAGTTTGCTGATAATTACAGGATGTACTCACGGAGTCACTTTGTGAAGGGCCTCGAAATACTTATACTATTGATTATTTACGAGATCTATGGAGAGTCGTACCGTAGCTCAACTCTTTATTTCTTCATCACAATGTCAATGTGGTTTTTGGCCATTTCTTGGTTATTTGCTCCATTCTTGTTCAATCCTTCTGGTTTTGATTGGCAAAAAACGGTGGACGATTGGACAGATTGGAAGCGATGGATGGGAAACCGTGGTGGTATTGGTATTCCGGCGAATAAAAGCTGGGAATCTTGGTGGGATGAAGAGAACGAACACCTGAAATTCTCAAATGCCAGGGGGAAAATACTTGAGATTCTTCTAGCATGTCGCTTCTTTATCTACCAATATGGAATCGTCTACCAACTGAATATTGCGCGCCGTAGCAAAAGTATTCTGGTATTTGCACTTTCGTGGGGAGTTTTGGTTATAGTCCTTATTGTCTTAAAGATGGTTTCCATGGGTAGACGAAGATTTGGCACCGACTTTCAGCTCATGTTTCGTATTCTCAAGGCGCTTCTGTTTCTTGGCTTCTTGTCAGTAATGACAGTGTTGTTCGTTGTATGCGCGCTTACTGTATCCGATCTGTTTGCTTCCATTCTTGCCTTCATGCCCTCTGGATGGGCCATTATTCTGATTGCGCAAACATGTAGGGGACTCTTGAAGTGGGCGAAACTATGGGCTTCGGTGAAAGAGCTTTCGAGAGCATATGAATATGTTATGGGACTAATAATCTTCATGCCAACAGCAGTTTTGTCATGGTTCCCATTTGTGTCGGAGTTCCAAACTCGGTTGCTATTCAATCAAGCGTTTAGTCGAGGACTTCAGATTTCAATGATTCTTGCCGGAAAGAAAGACACTTACAACAAAGCCGAATGA 5751 0.4039 MASTSGTKGPFEISRQPSKRMIRAPTRTVELPNEENIMDSEIVPSSLAVLVPILRTAIDIEVENPRVAYLCRFHAFEKAHTMDPTSSGRGVRQFKTYLLHKLEREGEITEKHTKRTDARELQSYYQYFYETRIRGGELTKKPEEMVRNVQIATVLYEVLKTLVTPQTIEEKTKRYAADVEKKKGQYEHYNILPLYAVGAKPVIMELPEIKAAIAALSKVDNLPLPLIHSRPDNDDSTMPMERVKNVNDILDWIASIFGFQKGNVANQREHLILLLANMDIRNRSASYEIREETVEKLMATTFKNYESWCQYVRCKSNIRYSDGHDKQQLDLIYIALYLLIWGEASNIRFMPECLCYIFHHMCNDVYGVLYSNAIQVSGDAYQIVTRDDEHFLREVITPLYEVLMKEAKRSNKGKASHTNWRNYDDLNEYFWSDKCFKLNWPMNLNSDFFRHNETQTANQGRGRGQASTGAGKKKPKTNFVEVRTYLHLYRSFDRMWIFFILALQAMIIIAWSNLGLIGVLTDDDVFRNVSSIFISYAILNFFQVTIDIILVWNALRNMKFTQLLRYFLKFVVAAVWVVVLPVSFSSSLQNPSGLLEFFTHWAGDWGPGSLYYYVVAIYMIPNIVAAILFFLPPMRRTLERSNMRIVTLLMWWAQPKLYVGRGMHESMFSLIKYTLFWIMLLISKLAFSYYVEISPLVEPTKLIMAMHIDNYQWHEVFPENDIHNLSVVISIWAPIILVYFMDTQIWYAIYATLFGGIIGAFSHLGEIRTLGMLRSRFQSVPLAFSESFWTGRNKKNIQEESDDAYERDNIAYFSQVWNEFINSMREEDLIGNRDRDLLLVPYSSVDVSVIQWPPFLLASKIPIAVDMAKDYKKDDDAELFRKIKSDGYMFSAVVECYETLKEIILSLLLDAEDRQVIQLICYKVEECIEHENFVKEFKMSGLPSLSEKLEKFLTLLRAEDNKSESQIVNVLQDIVEIIIQDVMIDGHAILHAPQHHNVQSGQQQRFVHIDTSFTQKRSVMEKVIRLHLLLTVKESAINVPQNIEARRRITFFANSLFMNMPKAPKVRDMLSFSVLTPYYKENVQYSNDELKKENEDGISILFYLTKIYPDEWANFDERMKSENVDEEEDREEYVRQWASYRGQTLSRTVRGMMYYWQALLLQYLIENSGDYGISEGYRTVEINDRDKRLLEQAKALADLKFTYVVSCQLYGSQKKSKDTFDRSCYNNILNLMVTHSALRVAYIDETEDTKGGKKVYYSVLVKGGDKYDEEIYRIKLPGPPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYYEEAFKMRNVLEEFHAHKGQRKPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLKVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAGYNSTLRQGYITHHEYIQVGKGRDVGLNQISLFEAKVANGNGEQTLCRDVYRLGRRFDFFRMLSFYFTTVGFYFSSMITVLTVYVFLYGRVYMVLSGVEREIIQSPNIHQSKSLEQALASQSVVQLGLLLVLPMVMEIGLEKGFRTALGDFIIMQLQLASVFFTFQLGTKAHYYGRTLLHGGSKYRPTGRGFVVFHAKFADNYRMYSRSHFVKGLEILILLIIYEIYGESYRSSTLYFFITMSMWFLAISWLFAPFLFNPSGFDWQKTVDDWTDWKRWMGNRGGIGIPANKSWESWWDEENEHLKFSNARGKILEILLACRFFIYQYGIVYQLNIARRSKSILVFALSWGVLVIVLIVLKMVSMGRRRFGTDFQLMFRILKALLFLGFLSVMTVLFVVCALTVSDLFASILAFMPSGWAIILIAQTCRGLLKWAKLWASVKELSRAYEYVMGLIIFMPTAVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGKKDTYNKAE 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00819 1916 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 331 440 IPR026899 -
Vifa2g00819 1916 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 248 1907 - -
Vifa2g00819 1916 Gene3D - 35 184 IPR023175 -
Vifa2g00819 1916 SMART FKS1_dom1_2 328 443 IPR026899 -
Vifa2g00819 1916 MobiDBLite consensus disorder prediction 455 474 - -
Vifa2g00819 1916 Pfam 1,3-beta-glucan synthase component 1039 1129 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vifa2g00819 1916 Pfam 1,3-beta-glucan synthase component 1132 1728 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vifa2g00819 1916 Pfam Vta1 like 51 173 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00819 Vifa-Chr2 212034026 212044737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00819 1 1910 Glycosyltransferase AT1G06490 68.492 0.0 2715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00819 K11000 - gmx:100815000 3171.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00819 2 212034026 212044737 Vifa2g00819 2 212034026 212044737 ECH