Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00678 ATGGTGGCCGACAAGAGCAAGAAGCTTAAGGTTTCTGAAAAGGGCGAGAACGCCGAGGAAATCGACGGAGAACTTGTCCTCTCCATTGAAAAGTTACAGGAAATGCAAGATGAGCTCGAAAAGATCAATGAGGAGGCTAGTGATAAAGTTCTGGAAATAGAGCAGAAGTATAATGAGATAAGGAAGCCGCTGTATGATCAGCGCAATGATCTTATCAAGTCTATTCCTGATTTCTGGTTGACTGCTTTTTTGAGCCATCCTGCTCTTGGCGAACTTTTGAATGAGGAAGATCAGAAGATATTTAAGCATTTAAGTTCTCTTGAGGTTGAAGATCATAAAGATGTCAAATCAGGCTATTCAATCACCTTTAACTTTAATCCTAATCCATATTTTGAGGATACAAAGCTTGTAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAAGGTTACTGCTACTCCCATTAAATGGAAAGAGGGCAAGGACATTCCAAATGGAGTTAGTCAAGAGAAGAAAGGAAACAAGCGAGCTGCTTCTGATATCAGTTTCTTTACCTGGTTTAGTGACACCGATGGGAAAGAAGATTTGGATGAGCTCGTTAATGATGAGGTTGCAGAACTAATCAAGGATGATTTATGGCCAAATCCACTTAATTATTTCAACAGCGAGGACCCTGATGAAGCAGAGGAGGATGATGATGAAGCTGGTGATGCGGGAAAGGATGACGACTCTGAAGACGATGATGATGATGACGACGATGAGGATGAATAA 771 0.4086 MVADKSKKLKVSEKGENAEEIDGELVLSIEKLQEMQDELEKINEEASDKVLEIEQKYNEIRKPLYDQRNDLIKSIPDFWLTAFLSHPALGELLNEEDQKIFKHLSSLEVEDHKDVKSGYSITFNFNPNPYFEDTKLVKTFTFLEEGTTKVTATPIKWKEGKDIPNGVSQEKKGNKRAASDISFFTWFSDTDGKEDLDELVNDEVAELIKDDLWPNPLNYFNSEDPDEAEEDDDEAGDAGKDDDSEDDDDDDDDEDE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00678 256 Gene3D Nucleosome assembly protein 76 224 - -
Vifa2g00678 256 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Vifa2g00678 256 SUPERFAMILY NAP-like 7 220 IPR037231 -
Vifa2g00678 256 Gene3D - 1 75 - -
Vifa2g00678 256 MobiDBLite consensus disorder prediction 223 256 - -
Vifa2g00678 256 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 14 247 IPR002164 GO:0005634|GO:0006334
Vifa2g00678 256 Coils Coil 25 59 - -
Vifa2g00678 256 MobiDBLite consensus disorder prediction 212 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00678 Vifa-Chr2 158731568 158735403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00678 K11290 - gmx:100793432 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00678 2 158731568 158735403 Vifa2g00678 2 158731568 158735403 ECH