Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00645 ATGTGCTTTCTATCGTCATCGTTTCTTCCTTTTTTACTGTACTTTGATGAAGTGAACGCTTTGCATCAATCTCAGTTTTCATCATCAGCTTTGAATTGGGTCAGCAGATTGAATTTCAAAGGCCTTTTTGAGATCTTTTCAATAATATTTAAGAGGGAACAAATTGCGCTACCTACTGAATCTTCTGAGGATTTAAGATTTCAAACGTTAAAACCTAGAGAATCTGATGGGAATGTTTCCAATTCGAGCGAGAGAGAACATTCTGTAGAACAAGAGATAAATATGGCATGTGACCAGAATCGGGCTTTATTGAAAGTATTCATGTATGACTTGCCTCCGGAATTTCACTTTGGGTTATTGGGTTGGAAGGGAAGTGTAAATCAAACATGGCCTGATGTGGATAACCCCAGTCGTGTCCCACGTTATCCTGGGGGACTGAATTTGCAGCACAGTATGGAATATTGGCTCACACTTGATCTTTTAGCATCAAAAAATGCTAAAGCTGGTCGGCCTTGTACTGTAATTAGAGTGCAGAATTCAAGTCAAGCAGATATTATTTTTGTGCCGTTTTTCTCTTCTCTGAGTTACAATCGGCATTCCAAGACTCAAGGGGAGGGACAAGTTAGTGTTAACAAAATGTTGCAAGACAGATTGGTACGTTTCTTGAGAGGGCGCAAAGAATGGAAACGTGCGGGTGGTAAGAATCATCTAATTGTAGCTCACCATCCTAACAGCTTGTTGGATGCGCGAAGAAACTTGGCTTCTGCTATGCTTGTGCTTGCGGATTTCGGAAGGTATCCTGTTGAGTTAGCAAATATCAAGAAAGATATCATAGCTCCCTATAAACATTTGGTAGGTACTATACCAAAAGCAGAGTCACCTTCATATGAGGAACGTTCCACACTCGTGTATTTCCAAGGGGCGATATACAGAAAAGATGGAGGAGTTATTCGCCAAGAACTGTATTACCTTCTCAAAGATGAGAAAGACGTGCATTTTGCATTCGGAAGCATAGGAGGAAATGGGGTTAATCAGGCAAGCCAGGGCATGTCGACGTCCAAATTCTGCCTGAACATAGCTGGAGATACTCCATCTTCCAATCGACTCTTTGATGCCGTAGTAAGCCATTGTGTTCCCGTGATCATCAGTGATGAAATTGAGCTACCATACGAAGATGTTTTGGACTACTCAGAGTTTTCCTTGTTTGTTCGCGCCGCCGATGCCATAAAGAAAGGCTACCTGTTGAATCTCCTTCATTCAATCAAGCGCGAGGAATGGATCAAGATGTGGGAAAGATTGAAGGAGATTACACATCATTACGAGTATCAATATCCATCCCGGCCCGGGGATGCAGTGGACATGATTTGGCAGGAAGTTGCGCGCAAGATATCTTCAATTCAGTTCAACTCACACAGGAAGAACAGATACAATAGATCTCAGCTTCTTGTCAAGACTAACTGA 1461 0.4203 MCFLSSSFLPFLLYFDEVNALHQSQFSSSALNWVSRLNFKGLFEIFSIIFKREQIALPTESSEDLRFQTLKPRESDGNVSNSSEREHSVEQEINMACDQNRALLKVFMYDLPPEFHFGLLGWKGSVNQTWPDVDNPSRVPRYPGGLNLQHSMEYWLTLDLLASKNAKAGRPCTVIRVQNSSQADIIFVPFFSSLSYNRHSKTQGEGQVSVNKMLQDRLVRFLRGRKEWKRAGGKNHLIVAHHPNSLLDARRNLASAMLVLADFGRYPVELANIKKDIIAPYKHLVGTIPKAESPSYEERSTLVYFQGAIYRKDGGVIRQELYYLLKDEKDVHFAFGSIGGNGVNQASQGMSTSKFCLNIAGDTPSSNRLFDAVVSHCVPVIISDEIELPYEDVLDYSEFSLFVRAADAIKKGYLLNLLHSIKREEWIKMWERLKEITHHYEYQYPSRPGDAVDMIWQEVARKISSIQFNSHRKNRYNRSQLLVKTN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00645 486 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 101 457 IPR004263 GO:0006486|GO:0016757
Vifa2g00645 486 Pfam Exostosin family 103 416 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00645 Vifa-Chr2 147236703 147241143 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00645 - - gmx:100795371 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00645 2 147236703 147241143 Vifa2g00645 2 147236703 147241143 ECH