Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00637 ATGAAGTTTGTTTTTGCAATTGTTATTATAGCACTTAGTATTTTAGGAATTGGTCTTGAAAGATGTGATTGCAAAACGGTGCAGTTCATTTTTGGAGATTCTCTATCGGATGTTGGAAACAACATCTACCTTTCCAAAAGTCTTGCTCAGGCAAGTTTGCCTTGGTATGGTATTGATATGGGAAATGGTCTTCCTAATGGCAGATTCTCTAATGGCCGTACAGTTGCTGATATTATAGGGGACAGCATGGGGCTTCCAAGGCCTCCAGCATTTCTGGACCCATCATTAACTGAAGATGTTATATTAGAAAATGGAGTGAACTATGCTTCTGGAGGTGGTGGCATATTGAATGAAACTGGAAGTTTTTTTATTCAAAGATTTTCTCTCTACAAACAAATTGAGCTGTTTCAGGGGACACAAGAACTAATTAGAAGTAAAATTGGAAAAGTGGAGGCAGAGAAGTTTTTTCAGGAAGCACGTTATGTTGTTGCTTTAGGTAGCAATGACTTCATCAATAATTACTTGATGCCTCTTTATACTGATTCATGGACTTACAATGATGAAACTTTCATGGATTACTTAGTAGGAACACTACAAGTTCAACTTAAGGGATTGTATGGCCTAGGAGCAAGGCAACTGATGGTGTTTGGGCTTGGCCCAATGGGCTGCATTCCACTTCAAAGAGTGCTTAGTACATCTGGGAATTGTCAAGAAAAAACAAACAAGCTAGCTCTGAATTTTAACAAAGCTTCAAGCAAGGTAGTAAATGATTTGGGAAAGCAACTTCCAAATTCAAGCTACAGATTTGGAGATGCATATGATGTGGTTAATAACGTGATTAGCAACCCAAGCAAATATGGATTTGATAACGCAGACTCACCATGTTGCTCATTTGGGAGGATTCGTCCAGCTCTAACATGTATACCAGCATCAAAACTGTGTAAAGATAGAAGCAAATATGTATTTTGGGATGAATATCATCCATCAGACAAAGCTAATGAAATGATTGCCACTGAACTCATCAAGAAATTTGGCTTTAAACGTGTTCATCAGACACAATCACCTTCACCATCCCCTGAACTTGCTCCATCTCCTACTTCAGATGATTAA 1110 0.3838 MKFVFAIVIIALSILGIGLERCDCKTVQFIFGDSLSDVGNNIYLSKSLAQASLPWYGIDMGNGLPNGRFSNGRTVADIIGDSMGLPRPPAFLDPSLTEDVILENGVNYASGGGGILNETGSFFIQRFSLYKQIELFQGTQELIRSKIGKVEAEKFFQEARYVVALGSNDFINNYLMPLYTDSWTYNDETFMDYLVGTLQVQLKGLYGLGARQLMVFGLGPMGCIPLQRVLSTSGNCQEKTNKLALNFNKASSKVVNDLGKQLPNSSYRFGDAYDVVNNVISNPSKYGFDNADSPCCSFGRIRPALTCIPASKLCKDRSKYVFWDEYHPSDKANEMIATELIKKFGFKRVHQTQSPSPSPELAPSPTSDD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00637 369 MobiDBLite consensus disorder prediction 349 369 - -
Vifa2g00637 369 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Vifa2g00637 369 Gene3D SGNH hydrolase 25 344 IPR036514 -
Vifa2g00637 369 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 343 - -
Vifa2g00637 369 Pfam GDSL-like Lipase/Acylhydrolase 29 338 IPR001087 GO:0016788
Vifa2g00637 369 SUPERFAMILY SGNH hydrolase 30 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00637 Vifa-Chr2 144579249 144581078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00637 29 337 Acyl Lipid Metabolism Gene Families AT4G10950 33.441 6.31e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00637 - - tpra:123915932 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00637 2 144579249 144581078 Vifa2g00637 2 144579249 144581078 ECH