Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00603 ATGGGCCAAGAAAACCACTTAACTCAAAAGAGAACAACCAGCGTCGGGGGAGTATTACCAACCACAACCTCCTCACGTAACCGATCACTCCCACGTGGCCGCCAGATCCAGAAAACATTCAACAACATCAAGATCACAATCCTCTGCGGCTTCGTTACAATTCTCGTCCTACGTGGCACTATCGGTGTTAATCTCGGCACGTCGCAGAACGACGCGCTCAATCAGAATGTTATCGAAGAAACCAATCGGATCCTCGCCGAGATCCGATCTGATTCCGATCCGGCCGATCGGAATCAGACCGAGACTTTCATGACTTTGAACGACACTTATGCGCTTGGTCCTAAGATCCGGAATTGGGATACCGAAAGAAAAACTTGGCTTCGGAAGAATCCTGACTACCCTAATTTTCTTAGAGGGAAACCCAGGATCTTGCTTCTTACGGGTTCGCCGCCCAAACCCTGTGATAATCCTATTGGGGATCATTATCTTTTGAAATCTATTAAGAATAAGATCGATTATTGCAGATTGCATGGCATTGAAATTGTGTACAACATGGCTCACTTGGACATGGAGCTTGCAGGTTACTGGGCCAAATTGCCCATGATTCGGAGGCTCATGTTATCACACCCTGAGGTGGAGTGGATTTGGTGGATGGACAGTGATGCTTTCTTCACGGACATGGTGTTTGAGCTTCCCATGAGTAAATATAATGGTTATAATCTGATTCTTCATGGGTATCCTGATTTGTTGTTCGAGCAGAATTCTTGGATTGCGGTAAACACGGGTAGCTTTTTGTTTCGCAATTGCCAATGGTCCTTGGATTTGCTCGATGCTTGGGCCCCCATGGGCCCGAAAGGACCAATTCGGGAGGAGGCTGGAAAGATTTTGACAGCAAATCTCAAAGGAAGGCCTGCATTCGAGGCTGACGATCAATCGGCGTTGATATATTTATTATTGTCAAAGAAGGATAAATGGATGGAAAAGGTATTTCTTGAGAATTCTTTTTATTTGCATGGTTATTGGGCTGGATTGGTGGATCGGTATGAAGAGATGATGGAGAAGTATCATCCGGGGTTAGGGGATGAGAGGTGGCCTTTTGTAACACATTTTGTGGGGTGTAAGCCTTGTGGGAGTTATGGAGATTATCCAGTGGAGAGATGCCTTAGTAGCATGGAGAGAGCTTACAATTTTGCTGATAATCAAGTGCTTAAGCTCTATGGGTTTAGGCACCGTGGATTATTAAGCCCTAAAATCAAGCGGATCCGGAATGAGACAATTACTCCTTTGGAGTTTGTAGACCAGTTTGATATACGAAGGCAACCTGCAGGCAAGATGGAATCAAGAAATTAG 1350 0.4526 MGQENHLTQKRTTSVGGVLPTTTSSRNRSLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGTSQNDALNQNVIEETNRILAEIRSDSDPADRNQTETFMTLNDTYALGPKIRNWDTERKTWLRKNPDYPNFLRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYNGYNLILHGYPDLLFEQNSWIAVNTGSFLFRNCQWSLDLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKDKWMEKVFLENSFYLHGYWAGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETITPLEFVDQFDIRRQPAGKMESRN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00603 449 FunFam xyloglucan 6-xylosyltransferase 2 139 290 - -
Vifa2g00603 449 MobiDBLite consensus disorder prediction 1 33 - -
Vifa2g00603 449 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 140 286 IPR029044 -
Vifa2g00603 449 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 25 434 IPR008630 GO:0016020|GO:0016757
Vifa2g00603 449 Pfam galactosyl transferase GMA12/MNN10 family 140 378 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00603 Vifa-Chr2 131445339 131447635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00603 1 449 Glycosyltransferase AT5G07720 78.337 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00603 K08238 - gmx:100793238 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00603 2 131445339 131447635 Vifa2g00603 2 131445339 131447635 ECH