Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00579 ATGGTTTCTGAGACGACGAACCAATCAAAGAATGTGTGTGTAATCGGAGCCGGGCCAGCCGGCCTAGTAGCGGCACGAGAGCTAAGAAAAGAAGGTCACAAAGCAATAGTCTTGGAACAAAATCATGACATTGGAGGACAATGGTTATACGACGATAAAAATGTCGAAGGAGAGGATCCTTTAGGAAGAAACCCTTTTCTAAAAGTTCATAGCAGTGTTTACAGGTCTTTAAGAGTAGCATCTCCAAGGGAAGTGATGGGATTCACAGACTTTCCATTTTTGATCAAGAAAGATAGAGACACGAGGAGGTTTCCTAGCCATGTTGAAGTGCTTAGGTATCTAAAGGATTTTTGTGAGTGGTTTGGGTTGAGGGAGATGATAAAGTTCAACACAAGGGTTCAACATGTTGGAATGTTGGATGATAATGGTGTTTGTAGAAATGAGTTAAAGTGGATTGTTACAAGTAAAGAAAAGAATTGTGATAAGTTTGTTGAAGAAGTTTTTGATGCAGTTGTTGTTGCCACTGGTCATTATTCTCAACCAAAATTGCCATCCATTAAAGGAATGGATACATGGAAAAGAAAACAAATGCACAGTCACATTTACAGGACTCCAGAACCATTCCACAATGAGGTTGTGGTGTTAGTTGGAAATTCCTTTAGTGGACAAGATATAGCAATAGAGCTAGTGGGAGTAGCAAAGGAAATCCATATAAGTTCGAGATCTCTTAATACTATAACTGAAGGGTTATCTAAAGTCATATCCAAACATGACACCTTACATCTTCACCCACAGATTGACACACTTGAAGAGGATGGAAGGGTGACTTTTAAGGATGGTTCTTGGCTTAAAGCAGACACTATTGTGTACTGTACCGGGTACTCCTATAGCTTCCCTTTTCTTGACACCAAAGGAATGGTGGTTGTTGATCATGACAGAGTAGGTCCTTTGTTTGAGCACACTTTTCCACCATCACTTGCTCCATCTCTTTCATTCATAGGCATCCCTAAAAAGATCTTAGGATTCCCTTTCTTTGAGTCCCAAGCAATGTGGGTAGCTCAATTGCTTTCTGGGAAAAAAGCATTACCATCATGGGATGAAATGATGAAATCCATCAAAGAGTTATACCATTCAAAAGAAGTAGCAGGCATCCCTACTCATGATATTGGAGACTTTGAGTATTGTGACAAATATGGAGAGAATGTAGGACTTCCACCATTACAAGAATGGAGAAAAGTGTTGTGCGTTACATCCATTGTTAACTCTATTGTCAACTTGGAGACATATAGAGATTCATGGGATGATGATGAGTTGCTTCAAGAGGCACTTAAAAGTCCTCACTTCACTCAACTTGGACTTGAAGATTGA 1368 0.3977 MVSETTNQSKNVCVIGAGPAGLVAARELRKEGHKAIVLEQNHDIGGQWLYDDKNVEGEDPLGRNPFLKVHSSVYRSLRVASPREVMGFTDFPFLIKKDRDTRRFPSHVEVLRYLKDFCEWFGLREMIKFNTRVQHVGMLDDNGVCRNELKWIVTSKEKNCDKFVEEVFDAVVVATGHYSQPKLPSIKGMDTWKRKQMHSHIYRTPEPFHNEVVVLVGNSFSGQDIAIELVGVAKEIHISSRSLNTITEGLSKVISKHDTLHLHPQIDTLEEDGRVTFKDGSWLKADTIVYCTGYSYSFPFLDTKGMVVVDHDRVGPLFEHTFPPSLAPSLSFIGIPKKILGFPFFESQAMWVAQLLSGKKALPSWDEMMKSIKELYHSKEVAGIPTHDIGDFEYCDKYGENVGLPPLQEWRKVLCVTSIVNSIVNLETYRDSWDDDELLQEALKSPHFTQLGLED 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00579 455 FunFam Flavin-containing monooxygenase 5 53 - -
Vifa2g00579 455 PRINTS Flavin-containing monooxygenase (FMO) signature 343 356 IPR000960 GO:0050660|GO:0050661
Vifa2g00579 455 PRINTS Flavin-containing monooxygenase (FMO) signature 224 239 IPR000960 GO:0050660|GO:0050661
Vifa2g00579 455 PRINTS Flavin-containing monooxygenase (FMO) signature 10 26 IPR000960 GO:0050660|GO:0050661
Vifa2g00579 455 PRINTS Flavin-containing monooxygenase (FMO) signature 278 305 IPR000960 GO:0050660|GO:0050661
Vifa2g00579 455 PRINTS Flavin-containing monooxygenase (FMO) signature 197 211 IPR000960 GO:0050660|GO:0050661
Vifa2g00579 455 Coils Coil 453 455 - -
Vifa2g00579 455 PIRSF FMO 243 388 IPR000960 GO:0050660|GO:0050661
Vifa2g00579 455 PIRSF FMO 8 256 IPR000960 GO:0050660|GO:0050661
Vifa2g00579 455 SUPERFAMILY FAD/NAD(P)-binding domain 8 242 IPR036188 -
Vifa2g00579 455 Pfam Flavin-binding monooxygenase-like 10 244 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vifa2g00579 455 Pfam Flavin-binding monooxygenase-like 260 378 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vifa2g00579 455 PANTHER DIMETHYLANILINE MONOOXYGENASE 10 448 - -
Vifa2g00579 455 Gene3D - 12 407 IPR036188 -
Vifa2g00579 455 FunFam Flavin-containing monooxygenase 185 291 - -
Vifa2g00579 455 SUPERFAMILY FAD/NAD(P)-binding domain 266 436 IPR036188 -
Vifa2g00579 455 Gene3D - 185 291 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00579 Vifa-Chr2 121762066 121765069 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00579 - - gsj:114416580 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00579 2 121762066 121765069 Vifa2g00579 2 121762066 121765069 ECH