Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00538 ATGGAATCTCAAAGTGGAAGTGGATCCAACATTCATCATACAACTCATCATTCAACAAATTCAAATGAAAGTGAACCATTCAACACAATAAAGAAGCCAGAACTTTCACATGATGATCACATTCATTTTATGCCAATTTCAACCACTACAACACCTCATAATGAAAATCCAACTTTTCTTCACACCAATGACCAAACAAACTCTTCAACAAATCTTGCTAACCCTTTTGGTGAATTTCATTCTCCTTATCCAAATAACTCTGACCCTTCATTTTCATCAACACAAAACCCTTTCTTAGTATTTGGTGATCATAATGATGCAAATGAATCTCATAAGTTGCATGATCATGCACCTTTTGAGCCTAATTTTCATCATCAACTACCTACATTTGAATCATCACTAGGAAATCCCTTCCATGAAAATGAAACTCACCATCATGATCATGGTAATGTTTGGCATCATCAAGATCATTGGAACTTTCCTAATCATGAAGAAACATCACATGCTTCTTCCTCAAGTCAACCATCACACCCTTTGTTCACACTTGAATCAACACAAAACCAGCAACTAGATAATGAATATCATAAGAACCATAGAGGTTTTGAATCTTCAACTCAGCAACACATGGATGATTCTCTAAGTGTTTCGAGTAACACCGAGAGAGATACTCATGCATATCAAAAATCGCGAAAGGATAGTGATGATGATATGCTGGTAAGCTCAATGCCAAAGCATGAACAAAAAGCTTTAACTCAGCAAAACATGCATGATTCTCATTCTACAAGTTTTGAATCTTCATCTCCGCAACACAAACATGATTCTCTAAGTGCTTCGAGTAACACCGAGAAAGATACTCATGTACATCCGAAATCGCAAAAAGAAAACATGTTAGCTTCAGAATCTAGTGATGATGATTTCTCAGTAAGATCAATGCCAAAGCATGAACAAAAAAAATCTTCAACATTAGTAGTTGTTCCTGAGACGATACAAAACCCTCCGATACAGATAATGGAAAGACAAGAGAATTGTTCTGTAACTCCATCTTCAACACCGAGAATTCCATTACATGTTTTCGCGAGAGATAGACTAAATGCTCAATGGAGCGGTGCCTCTAATGAATCGTTGTTTAGCATTCAAATGGGAAAGAGTTTCTCGAACGACATGGCTTGGTTGACTAAATCTGGAGAGTTGGATAAGAATGTCGATCACATGAACATGTCGGGTGGTGTTCAAAGTAATCATCCTCCACTTTCACCTCAACCACATGCTACTAAATTCAATGATATTAGCACGAATTTCGCTGAGCAACACGAAAGTAATTCGAAAGTAACTGAGGCAACAGCGGCAGAGACAATGCGAGAGGTTATAATGGAAACTAGTACAGCACCAGAGAATAATAAAAGTAAAGGACCAACAACATTTTTTAATGCGGCGATGCATTCGGACGCACTTTCTAGTTCTAATAATGACCATTCTCGGCATTCAAATGGAAGCACCCAATCTTTTGCATTTAAATCATACGCAGATGGAGACAAAACTCATTTGTCACATGGAGACAAGACTCATTCGTCAAAACACGGCGAAGAGACGAAAAAGCAGCTGAAGCAGACAGAGCAACAGAATTCGACGAAAACAACGGTAGCACCATCTGCAGCTCAAAACACAAAACCAGCATCAAATGCTTCGCAGAACAAATGGCTATCTTGCTTCACATGTTGCCACTAG 1725 0.3826 MESQSGSGSNIHHTTHHSTNSNESEPFNTIKKPELSHDDHIHFMPISTTTTPHNENPTFLHTNDQTNSSTNLANPFGEFHSPYPNNSDPSFSSTQNPFLVFGDHNDANESHKLHDHAPFEPNFHHQLPTFESSLGNPFHENETHHHDHGNVWHHQDHWNFPNHEETSHASSSSQPSHPLFTLESTQNQQLDNEYHKNHRGFESSTQQHMDDSLSVSSNTERDTHAYQKSRKDSDDDMLVSSMPKHEQKALTQQNMHDSHSTSFESSSPQHKHDSLSASSNTEKDTHVHPKSQKENMLASESSDDDFSVRSMPKHEQKKSSTLVVVPETIQNPPIQIMERQENCSVTPSSTPRIPLHVFARDRLNAQWSGASNESLFSIQMGKSFSNDMAWLTKSGELDKNVDHMNMSGGVQSNHPPLSPQPHATKFNDISTNFAEQHESNSKVTEATAAETMREVIMETSTAPENNKSKGPTTFFNAAMHSDALSSSNNDHSRHSNGSTQSFAFKSYADGDKTHLSHGDKTHSSKHGEETKKQLKQTEQQNSTKTTVAPSAAQNTKPASNASQNKWLSCFTCCH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00538 574 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 258 573 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 510 535 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 206 222 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 164 179 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 1 32 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 276 316 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 1 29 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 130 179 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 536 560 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 138 163 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 201 321 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 509 560 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 245 275 - -
Vifa2g00538 574 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00538 Vifa-Chr2 103378705 103381002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00538 - - cam:101499688 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03436 4 1074456051 1074457284 Vifa2g00538 2 103378705 103381002 PCT