Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00537 ATGGACCTTACTCTTAAGCTTTCTCCTTGTGGTGAAAATGTAGAAGAAAGGAGGTTGGTAAGGTCATCATCATTGGTGAGTGGAGAGATGGGAAGTATCAGTGTTCCAAATTGGTGTAGTTTTAGGTCATCTATAGAGAGATCTTCATCTCTTACAATCGATAGTGGGGAGAGAATGGTTCTAGAGAGGCAGAGAAAGATGGCAGCTTCAAAGCTTTATGGTCCAATACATTCATCTGAAGGAGTAATTGCTTCTAGTTTCCAGATATCAACCAAACACAAAAACAAATCAACGATTTTCCCGAAAACAACAATCAATGAACTTCCACTTCTGCCTAAATCTACCGATACTAAGATTAAGAATCCAATAAAAAAGCTTAATCTCCCTAACTACTGCAGTCTTAAGGGTGATGTGATGGAGAAATTGCGACAAATGCCGACCGTAACAACGACGGGAGACGGCCCAAATGGTAAGAGAATAGAAGGGTTTCTGTACAAGTATAGATCTGGTGAAGTTTGTATTGTATGTGTCTGCCATGGTAACTTCCTCACACCAGAAGAGTTTGTGATTCATGCTGGTGGAAAAGAAGTTGCTAATCCAATGAAGCATATCACTGTTCACCCTGTCTCACTTTAG 636 0.4025 MDLTLKLSPCGENVEERRLVRSSSLVSGEMGSISVPNWCSFRSSIERSSSLTIDSGERMVLERQRKMAASKLYGPIHSSEGVIASSFQISTKHKNKSTIFPKTTINELPLLPKSTDTKIKNPIKKLNLPNYCSLKGDVMEKLRQMPTVTTTGDGPNGKRIEGFLYKYRSGEVCIVCVCHGNFLTPEEFVIHAGGKEVANPMKHITVHPVSL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00537 211 Pfam Tify domain binding domain 174 205 IPR032308 -
Vifa2g00537 211 PANTHER AFP HOMOLOG 2 91 208 IPR031307 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00537 Vifa-Chr2 103375946 103378214 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00537 - - gmx:100788995 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00537 2 103375946 103378214 Vifa2g00537 2 103375946 103378214 ECH