Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00446 ATGGATTTGGCGTCGAATCTCGGTGGGAAGATTCAAAAGGATGAAGTTCTCTCCGCCGTCGATAAGTATGAGAAGTATCATGTACACTATGGAGGTCAAGAGGAAGAAAGGAAAGCTAATTATAGTGATATGGTTAATAAATACTATGATCTTGTGACTAGCTTTTATGAGTTCGGCTGGGGAGAATCTTTCCATTTTGCACAAAGATGGGTAGGGGAATCTCTTAAAGAGAGCATCAAGCGACATGAACACTTTCTTGCTTTACAGCTTGGTCTTAAGCCCGGACAGAAGGTTTTGGATGTTGGGTGTGGCATTGGGGGACCGTTAAGAGAAATTTCTCGATTCAGCTCGGCATCTGTTACAGGGTTGAATAACAACGAGTACCAGATCACCAGGGGAAAGGCACTCAATCGCAAAACTGGAGTGGACAAGACTTGCAATTTCGTCAAGGCTGACTTCATGAAGATGCCATTCGAAGACAACAGTTTCGATGCAGTATATGCTATAGAAGCCACCTGCCATGCACCAGATGCTTATGGATGCTACAAAGAGATTTATAGAGTGTTAAAGCCCGGCCAATGTTTTGCTGCATATGAATGGTGCATGACTGATTCTTTTGATCCCAATAACCAAGAACACCAAAAAATCAAGGCAGAAATTGAGATTGGTGATGGGCTTCCTGACATTAGATTGACCACAAAGTGTCTTGAAGCTCTTAAGCAAGCTGGTTTTGAGGTCATATGGGAGAAAGATCTAGCATTGGACTCTCCTGTTCCTTGGTACTCACCTCTAGACGCGAGTTACTTCTCACTTAGCAGCTTCCGTCTTACAGCTCTTGGACGACTTTTCACCAAAAATATGGTCAAGACACTGGAGTTTGTTGGATTTGCTCCAAAGGGGAGTCAAAGGGTTCAGGATTTCCTAGAGAAGGCTGCAGACGGCCTAGTTGAAGGTGGAAAGAGAGAGATTTTCACACCAATGTACTTCTTTTTGGCGCGGAAGCCTCATTCAAGCAGCAACTAA 1023 0.4379 MDLASNLGGKIQKDEVLSAVDKYEKYHVHYGGQEEERKANYSDMVNKYYDLVTSFYEFGWGESFHFAQRWVGESLKESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSASVTGLNNNEYQITRGKALNRKTGVDKTCNFVKADFMKMPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCMTDSFDPNNQEHQKIKAEIEIGDGLPDIRLTTKCLEALKQAGFEVIWEKDLALDSPVPWYSPLDASYFSLSSFRLTALGRLFTKNMVKTLEFVGFAPKGSQRVQDFLEKAADGLVEGGKREIFTPMYFFLARKPHSSSN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00446 340 PANTHER ZGC:194242 2 335 - -
Vifa2g00446 340 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 335 IPR030384 GO:0008168
Vifa2g00446 340 Pfam Sterol methyltransferase C-terminal 272 335 IPR013705 GO:0006694|GO:0008168
Vifa2g00446 340 CDD AdoMet_MTases 97 192 - -
Vifa2g00446 340 Gene3D Vaccinia Virus protein VP39 19 268 IPR029063 -
Vifa2g00446 340 FunFam Methyltransferase 19 270 - -
Vifa2g00446 340 Pfam Methyltransferase domain 99 193 IPR013216 GO:0008168
Vifa2g00446 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 336 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00446 Vifa-Chr2 76870517 76876052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00446 83 251 Acyl Lipid Metabolism Gene Families AT1G48600 31.176 1.85e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00446 K00559 - zju:107425735 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00446 2 76870517 76876052 Vifa2g00446 2 76870517 76876052 ECH