Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00350 ATGTCTCTTTCACATAGTTTCATCTTTCTCTTCTCCATCACACTCATGAATGGAGTTTTCTCACAACAATCCAACATCATATTACCCTCCGAACAAAGAAACACCGAAAAACTAACACATATCCACTTCTACTACCATGACATCCGAAACAACAAAAACCCTACCATGATACAAATCATTGACACACCAAAAAACGTGGCTAATGGATTTGGTTCAGTTTTCATGATGGATGATGCAATGACAGAAGGACCAGAGTTAAGTTCAAACCACATTGGAAGAGCTCAAGGGCTAATAGGTCTTTCATCACTACATGATATTGCTGAGTTTATGTTGATAAATTTAATTTTTGACCAAGGGAGTAGTTATGCTGGAAGTACTCTAAGTATGTTGGGGAGGAACCCTATTTCAAAACAAAATAGAGAAACAAGTATTGTTGGTGGAACTGGTGTTTTTAGGTTTGCTAGAGGCTTTGCCATTGCAAATAGCGTTAACTCCATTTCTACACCTCAACATTATATTGTTGAGTATAATATTACTGTTTCTCATCCCTAG 552 0.3696 MSLSHSFIFLFSITLMNGVFSQQSNIILPSEQRNTEKLTHIHFYYHDIRNNKNPTMIQIIDTPKNVANGFGSVFMMDDAMTEGPELSSNHIGRAQGLIGLSSLHDIAEFMLINLIFDQGSSYAGSTLSMLGRNPISKQNRETSIVGGTGVFRFARGFAIANSVNSISTPQHYIVEYNITVSHP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00350 183 Gene3D - 26 181 IPR044859 -
Vifa2g00350 183 PANTHER NUCLEOPORIN-RELATED 32 178 IPR004265 -
Vifa2g00350 183 Pfam Dirigent-like protein 39 180 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00350 Vifa-Chr2 56514236 56514787 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00350 - - gmx:100306647 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00350 2 56514236 56514787 Vifa2g00350 2 56514236 56514787 ECH