Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00346 ATGACTACCATTTTTAGTTTCTTTATTCTTTTCACTAGTTGCTTCATGAGTGTTCATGGAAGAGTAATGTCTTCAGAAGAATCTCATATAATGTTACCCTCACAAAATCTACAAAGTTTCACCCATTTACACTTCTATTTTCATGACATTCTAGATGGTGAAAAAGCAACTACACTCAAAATTATAAACCCACCTAGTGAATCATCTCATGGTCCTTTTGGAGCTACTTACATTATAGATAACCCTTTGACTAAGGAACAAAATCTAAGTTCAGAGCTTATTGGAAGAGCTCAAGGAACCTATGGTTTGGCTTCTCAACAAGGTGATTTTGCTTTTAAGATGGATATTAATTTTGTTTTTATAGAAGGTAGATACAAAGGGAGCACTCTTACTATGCTTGGAAGGAATGTTATTGTGGATGAAGTTAGAGAAATGCCTATTGTTGGAGGAACTGGTGCCTTTAGGTTTGCAAGAGGGTATGCTTTGGCAAAGACTGTTTGGTATAATTCTACATCTGGAAATGCTATTGAGGAGTTTAATATTACAATTTGTCATTTCCAAATTTCTTGA 570 0.3456 MTTIFSFFILFTSCFMSVHGRVMSSEESHIMLPSQNLQSFTHLHFYFHDILDGEKATTLKIINPPSESSHGPFGATYIIDNPLTKEQNLSSELIGRAQGTYGLASQQGDFAFKMDINFVFIEGRYKGSTLTMLGRNVIVDEVREMPIVGGTGAFRFARGYALAKTVWYNSTSGNAIEEFNITICHFQIS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00346 189 Pfam Dirigent-like protein 41 183 IPR004265 -
Vifa2g00346 189 Gene3D - 26 178 IPR044859 -
Vifa2g00346 189 PANTHER NUCLEOPORIN-RELATED 36 181 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00346 Vifa-Chr2 55660694 55661263 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00346 - - psat:127085722 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00346 2 55660694 55661263 Vifa2g00346 2 55660694 55661263 ECH