Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00328 ATGGGTTTTGAAAGGAAGGTTTATGGTTGGATTGCGATAACCATTTGTATGGTGATTTGTCTTAATCCATGCATCTGTTTGGAAGAAACTAATGAAGGGAGTTGCAATATATACGAAGGAAGTTGGGTTTATGATGAATCTTACCCTCTCTATGATTCATCAAAATGTCCTCAAGTTCGTTTTCAATACGATTGCTTGAAATATGGCAGAACTGATAAAGAATATCTCAAATACAGATGGCAACCAAGCAATTGTAACTTACCAAGATTTGATGGAAAAAGTTTCTTAACGAAATTCAAGGGAAAACAAATAATGTTTGTTGGAGATTCAATTAGTGTGAACCAATGGCAATCATTAATATGTTTGCTTCATTCTACTGTACCTGATGCTCATATAATAAGAGGAGGCCGGAAACCCATCACAAATCACACATTTCAGGAGTATGGAGTTTCAATTGTCGTCTATCATACGACATATTTAGTTGATATTGAAGTGGAAACAATTGGTAGAGTATTGAAACTTGATTCTCTCAAGAGTGGAAATATATGGAAAGAAATGGATGTTTTGGTTTTCAACACTTGGCTTTGGTGGTACCGCACTGGACCCAGACAACCATGGGATTATATTCAAATAGGTAACGAAACAGTGAAAGATATGGATAGAATGGAAGCTTTTAGAACTGGTTTGACAACCTGGGCTAAGTGGGTTGATAGAGAAGTTGATGCAACCAAAACTAAAGTTCTTTTTCAAGGAATTTCTCCTATGCACTACCAGGGGGAAGAATGGAATGAGCCCGGAGTAACGAATTGTGCAAAAGAGACAACACCAATAAATGGATCATCATCAACACGTGGGTTACCAAAAGCATCATATGTATTAGAAAGTGTTTTGAAGAAAATAAAGAAGCCGGTTCATCTTTTCAACATTACAGCTCTCTCAGAATTGAGAAAAGATGGCCATCCTAGCTCTCATAATAGCTTTCATGACATGGATTGTACTCATTGGTGTGTAGCTGGGGTACCAGATACTTGGAATGAGCTTATGCTTAAATCAATTATAAATTAG 1065 0.3671 MGFERKVYGWIAITICMVICLNPCICLEETNEGSCNIYEGSWVYDESYPLYDSSKCPQVRFQYDCLKYGRTDKEYLKYRWQPSNCNLPRFDGKSFLTKFKGKQIMFVGDSISVNQWQSLICLLHSTVPDAHIIRGGRKPITNHTFQEYGVSIVVYHTTYLVDIEVETIGRVLKLDSLKSGNIWKEMDVLVFNTWLWWYRTGPRQPWDYIQIGNETVKDMDRMEAFRTGLTTWAKWVDREVDATKTKVLFQGISPMHYQGEEWNEPGVTNCAKETTPINGSSSTRGLPKASYVLESVLKKIKKPVHLFNITALSELRKDGHPSSHNSFHDMDCTHWCVAGVPDTWNELMLKSIIN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00328 354 Pfam PMR5 N terminal Domain 34 86 IPR025846 -
Vifa2g00328 354 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 87 350 IPR026057 GO:0016740
Vifa2g00328 354 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 22 349 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00328 Vifa-Chr2 52372074 52374133 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00328 - - psat:127085757 631.713