Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10755 ATGGCAACCAGAAGAGGAAGATGCAGTCAGTGTGGAAGGGCTATACAAGTAGAAGCCTACGGCTATGCGAATTCCATGGCCATGATGTGTTCTAGTTGCCACTCTCAAGGTTTCTCCATGCAACCTAATTACCCTTTTGTCAATAACAACAACAACTCACCTCCTCCTCCGTCCGCCTATGGACGACGTCCGTCTTGGCCACATACACTGATGGGCCCACAAGCTCCAATGACACCACCTTCTCCATATGGTAACAAGAGGGCTGTGTTGTTTGGTATTAGCTATAGTAATAGTGCTAACAGCCTTAAAGGCTCTCTTAATGATGTTCACAGCATGAAGTACTTTCTCACACAAAAGTTAGGTTTTCCTACAGATTGCGTTCGCATGCTCACAGATGAACCTGGAGAGAGAAACCCGACGAGAATTCCAACAAAATATAACATGCGAATGGCAATGAAGTGGTTGGTTGAGGGCTGCCAAGCAGGCGACTCATTGGTGCTTCACTTCTCAGGACATGGATCAAGGCAAGTGGACCATGGCATGGATGAGGTTGATGGCTATGACGAAGCTATATGCCCTGTTGATTATGAGCGCGAAGGGAAGATTCTTGACGATGAAATCAATGCTACAATTGTTAGGCCTCTACCTTATGGTGCCAAACTTCATGCTGTCACTGATACATGCTTTAGTGGCACAGTTCTTGATTTACCATTCATGTGCAGGATGAACAGAAAAGGTTATTATGGATGGGAAGATCATAGAAGCCACAGAGCTGGTTACAAAGGCACAAGAGGTGGGCTAGCAGTTTGCATTTCAGCTTGTGACGATGATGGAAGTGCAGCAGACACATCTGCCTTTACTGGCATGGAAAGTTCTGGTGCATTGACTTACAGCTTCATCCAAGCCATGCAAGTTGAACGAAAACTGACTTACGGTCAATTGCTTAATGCCATGCGTTCTTCGATTCGTGGCGCTAGAGAAGGAATGTTTGGCCCGAATCAACAACAGCATGTCATGGACAATCGGCAGCAGTATGCTCATGATCCACAGCTGTCATCTTCTGAGAAATTCGATATTTATTCGAAGACTATTGCAATATGA 1101 0.4541 MATRRGRCSQCGRAIQVEAYGYANSMAMMCSSCHSQGFSMQPNYPFVNNNNNSPPPPSAYGRRPSWPHTLMGPQAPMTPPSPYGNKRAVLFGISYSNSANSLKGSLNDVHSMKYFLTQKLGFPTDCVRMLTDEPGERNPTRIPTKYNMRMAMKWLVEGCQAGDSLVLHFSGHGSRQVDHGMDEVDGYDEAICPVDYEREGKILDDEINATIVRPLPYGAKLHAVTDTCFSGTVLDLPFMCRMNRKGYYGWEDHRSHRAGYKGTRGGLAVCISACDDDGSAADTSAFTGMESSGALTYSFIQAMQVERKLTYGQLLNAMRSSIRGAREGMFGPNQQQHVMDNRQQYAHDPQLSSSEKFDIYSKTIAI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10755 366 Gene3D - 40 365 - -
Vifa1g10755 366 PANTHER METACASPASE-4 82 360 - -
Vifa1g10755 366 MobiDBLite consensus disorder prediction 49 70 - -
Vifa1g10755 366 SUPERFAMILY Caspase-like 74 188 IPR029030 -
Vifa1g10755 366 Pfam Caspase domain 86 353 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10755 Vifa-Chr1 1809624366 1809625818 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10755 K22684 - gmx:100779288 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10755 1 1809624366 1809625818 Vifa1g10755 1 1809624366 1809625818 ECH
Vifa1g10755 1 1809624366 1809625818 Vifa1g10755 1 1809624366 1809625818 PCT