Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10684 ATGGAACTAGCTAGGCGTAGAGTAATGGAGAATGGGGGAGATGAAGAGATGGATGTTGAAACTCAGGTATCGGAGCAACGATTCTATCCTTCGCATCCGGGTTTGGTGAAGAAGAGAGCTTATATATTTGATGGTTTGGGGAATTTTTATAATAAGGAATGGGATTTGTCTGACCTTAATCTTAATCGAAACGAAGAGAAGGAATCGGATGTGGAGGAAGGACGGGGGAATGAGTTTTCTTGGTACCATGTTGAACTTCCGAAAGGGAATCAGAAGTTGGCGCAATCTGCACAGGATTTGATTGGTGTTCTATGTCCGCCGTTGAAACTACAAGATATTCTTTCGCTTATTAGCAATGGACCGTTTTGTGCACATGTAGATGGTGCACTTGTGTTTCGGGTTAATTCACCCGGTCCTCCTTCTAGTGATTTTACATTTAGGCTTGCTGCTAGAATAACTGAGAATTCAGTGATTACAGTGTCCTTAGGGCGAGTTCCTCGGCTAGGTTTCTCGCGTATGGGGGAATCTTTACTTTCAGAAGTTCCTAGCGTTGAAAGCTCCTCTCGGTTTAATGGTCAGCAGAAGGAAGGAAGTGGGCCTGTGATTAAGGAGCATGTTCTTGAATTCTTGTTGACTATGAATCATTCTGAGGAAGCTGACAATCCTGTTCCTAGATCTGTCTCAAATCTCGTTGTGCACATAGTTGATACACATGTCGATCAGCTTCAAGATCTTGTGACAAAGCTTGAGATGGAGTTGGACTCCGTGGAGCTTGATCTTGATAAAGGTGGTTATGCTCTGAAGAAACAAATGCTAGATGATAGAAGATTCCCTAAGCTACATATTAATTTGCAGCGGCTCCTGCAGGTGATTGCCCATGGAGAACAAATTTATCTTCGTGTAAAAGAAAAATCCTCTTCGAAAAGATGGTTTGCGAACGAAGACATTAACTCCCTTGAAGAACTAATTGGAAGGTTGAGAAGGCTAAAGGAGAATGTAGGGTTTATAGTTAATCGTGTCACGGCAATACAGGCTGGTCTTGACAGCTGGCAGTCGGAGCAAATAAACCGTAAACTATACTATCTATCGTTTCTATCGATAATATTCCTCCCACTGTCCATCATAACTGGAGTTTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGTCAAAATGCCCCGGAGCTAAAGGATGGTTTCCGCAATGTCATGTTAGTGTGTGTCGCTATGCTTGTCCTTGTACTACTTTGCTTCATTTTCCCAGCTCTTTATATGCGAATAGCTGCTGTTTGGCGAGATAAGAGAACTCTTGGAAGACATTGGTCACTTAACAGGAAGTCATTGCTGAGGAGACCGTTAAGAATAGAAGATGCGGCGAGAGGGGGTTACCTTCGGATTTAA 1401 0.4304 MELARRRVMENGGDEEMDVETQVSEQRFYPSHPGLVKKRAYIFDGLGNFYNKEWDLSDLNLNRNEEKESDVEEGRGNEFSWYHVELPKGNQKLAQSAQDLIGVLCPPLKLQDILSLISNGPFCAHVDGALVFRVNSPGPPSSDFTFRLAARITENSVITVSLGRVPRLGFSRMGESLLSEVPSVESSSRFNGQQKEGSGPVIKEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIVDTHVDQLQDLVTKLEMELDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVIAHGEQIYLRVKEKSSSKRWFANEDINSLEELIGRLRRLKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNAPELKDGFRNVMLVCVAMLVLVLLCFIFPALYMRIAAVWRDKRTLGRHWSLNRKSLLRRPLRIEDAARGGYLRI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10684 466 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 354 419 IPR045863 -
Vifa1g10684 466 Pfam CorA-like Mg2+ transporter protein 219 419 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa1g10684 466 Coils Coil 312 332 - -
Vifa1g10684 466 Gene3D Magnesium transport protein CorA, transmembrane region 351 424 - -
Vifa1g10684 466 PANTHER OS08G0130000 PROTEIN 15 466 - -
Vifa1g10684 466 SUPERFAMILY CorA soluble domain-like 70 345 IPR045861 -
Vifa1g10684 466 Gene3D Magnesium transport protein CorA, transmembrane region 224 350 - -
Vifa1g10684 466 Coils Coil 239 259 - -
Vifa1g10684 466 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10684 - - psat:127083848 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10684 1 1795876319 1795878814 Vifa1g10684 1 1795876319 1795878814 ECH