Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10681 ATGCAGTCTCCGGTGCGCACACCGTCGCCAATGCAAGTCACTCCAGTGAAGCCTTTGAAGCAGCCAAAACCAAAAGCCAGGGACCCTAACAAAAGGGATATGAATCTTGAGGAAAAACAGAAATTGGGAACTGGTTTGCAGAGCTTGCCACCGGAGAAAATGGAACAGGTTGTACAGATCATAAGGAAGAGGAATGGTCATTTGGAGCAGGATGGGGATGAGATTGAGCTTGATATTGAAGCTGTTGACACTGAGACTCTATGGGAACTTGATCGACTAGTGACTAACTGGAAGAAGATGATGAGCAAGATCAAGCGGCAAGCACTAATGGACAATGTGAATAACAATGTGGCTTCAAACAATGACAATGGGGAAGTACCTGCTGGTGAAAAGGTTGATGAAGTGTCACCTGTTGAGCCAAAGAAGCCAAAGAAAGCTGAAGCAGGGGATGAGGATGTTGACATTGGGGACGATATGCCAATGAGTGTGTTTCCCCCTGTGGAGATTGAGAAAGATAAAGATGTTATCGTTGGAGGCCACCCAAGTAGTAGTTCGAGTAGCTCGAGCAGTTCAGGCAGCGATTCCTCTTCATCTAGTGATTCAGATTCAGGTAGTTCCTCTGGGAGTGATTCTGAAGCAGACAATGGACACTTATAG 657 0.4612 MQSPVRTPSPMQVTPVKPLKQPKPKARDPNKRDMNLEEKQKLGTGLQSLPPEKMEQVVQIIRKRNGHLEQDGDEIELDIEAVDTETLWELDRLVTNWKKMMSKIKRQALMDNVNNNVASNNDNGEVPAGEKVDEVSPVEPKKPKKAEAGDEDVDIGDDMPMSVFPPVEIEKDKDVIVGGHPSSSSSSSSSSGSDSSSSSDSDSGSSSGSDSEADNGHL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10681 218 Gene3D - 27 115 IPR038336 -
Vifa1g10681 218 MobiDBLite consensus disorder prediction 179 218 - -
Vifa1g10681 218 MobiDBLite consensus disorder prediction 127 151 - -
Vifa1g10681 218 MobiDBLite consensus disorder prediction 21 39 - -
Vifa1g10681 218 PANTHER OSJNBA0053K19.4 PROTEIN 8 211 - -
Vifa1g10681 218 Pfam Bromodomain extra-terminal - transcription regulation 34 95 IPR027353 -
Vifa1g10681 218 MobiDBLite consensus disorder prediction 1 51 - -
Vifa1g10681 218 ProSiteProfiles NET domain profile. 24 105 IPR027353 -
Vifa1g10681 218 MobiDBLite consensus disorder prediction 114 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10681 Vifa-Chr1 1795105029 1795105880 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10681 - - gmx:100802622 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10681 1 1795105029 1795105880 Vifa1g10681 1 1795105029 1795105880 ECH