Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10674 ATGGCAGCCACTACCAGAGCGATTAGCAGCTCAACCTACTCTCTTCTCACCACCAATAAGCCCTTTCTTGGTGCCCGTGCTCTTCGTCTTAACAATCTCAAGGTTTCTTCTAGAACTACTAGGTCTTATACTTGCAAGGCTATCTATTACCCTGAGGTTACTGTCAAGGAGGATGGTCAGCCACAAACCCTTGATTATAGAGTCTTCTTTCATGACAAATCTGGCAAAAAGGTTTCTCCATGGCATGATGTTCCGTTACAGCTAGGTGATGGTGTCTTCAACTTCATTGTTGAAATACCAAAAGAATCCAGTGCAAAGATGGAGGTTGCTACCGACGAGCCTTTCACTCCTATAAAACAGGATATAAAAAAGGGGAAGCTTCGTTTTTACCCCTATAATATACATTGGAACTATGGCTTACTTCCTCAAACATGGGAAGATCCAACTCTTGCTAACCATGAAGTTGAAGGAGCATTTGGAGATAATGATCCAGTTGATGTGGTTGAGATCGGTGAAAGCCAAAGGAAAATAGGAGAGGTTCTCAGAGTCAAACCCTTAGCTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTAGCAATTTCATTAGATGATCCTAAAGCTTCACTTGTGAATGACGTCGATGATGTTGAGAAGCATTTTCCAGGAACCCTCACTGCAATTAGGGACTGGTTCAGAGACTACAAGATACCTGACGGGAAGCCTGCTAATAGATTTGGTCTTGGCAACAAGGCAGTAAATAAGGATTATGCGCTGAAAATAATCACAGAGACGAACGAGTCTTGGAGTAAACTTGTGAAGAGATCAATTCCTGCAGGAGAGCTGTCACTTGTGTAA 867 0.4233 MAATTRAISSSTYSLLTTNKPFLGARALRLNNLKVSSRTTRSYTCKAIYYPEVTVKEDGQPQTLDYRVFFHDKSGKKVSPWHDVPLQLGDGVFNFIVEIPKESSAKMEVATDEPFTPIKQDIKKGKLRFYPYNIHWNYGLLPQTWEDPTLANHEVEGAFGDNDPVDVVEIGESQRKIGEVLRVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGNKAVNKDYALKIITETNESWSKLVKRSIPAGELSLV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10674 288 ProSitePatterns Inorganic pyrophosphatase signature. 161 167 - -
Vifa1g10674 288 Gene3D Inorganic pyrophosphatase 52 288 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa1g10674 288 CDD pyrophosphatase 91 270 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa1g10674 288 SUPERFAMILY Inorganic pyrophosphatase 54 284 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa1g10674 288 Pfam Inorganic pyrophosphatase 95 272 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa1g10674 288 PANTHER INORGANIC PYROPHOSPHATASE 55 278 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vifa1g10674 288 FunFam Inorganic pyrophosphatase, mitochondrial 52 288 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10674 K01507 - gmx:100798544 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10674 1 1793737794 1793740118 Vifa1g10674 1 1793737794 1793740118 ECH