Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10662 ATGTCAAGGAGGCCAGTAAATCCTTCACGTCGGTTAGGTGATGGTGGAAGTATACCATTTGTTGCCTCTATCCAGTCTAAATCTCAAAACTCTCCTTTGATATCTATTGGGCTTGTTATTGTGGGGGCGTTTCTTCTGATTGGTTATTTTTACAGCAGTTCAGGTGGAACTAGTATGGATATTAAGGACGTGAATAAACTTGAAGGTGGTTCATCATGTACATTAGAAGTACTACAAGCATTGCCTGTTTTGAAGAAAGCATATGGAGACAGCATGCATAAGGTTTTGCATGTTGGCCCGGACACTTGTACTGTGGTATCTAGTTTGTTAGCAGAAGAGGATACCGAGGCTTGGGGAATAGAACCTTACGAATTAGATGATGCAGGCGCAAAGTGCAAAAGTCTTGTACGCAAGGGCATTGTGCGCGTGGCTGACATAAAGTTTCCTTTACCTTATCGCCCAAAGTCATTTTCTCTTGTCATTGTGTCGGATGCATTGGACTACTTATCTCCAAAATACCTGAATAAAACCTTGCCAGAGTTAGTGAGGGTATCTTCTGACAGCGTGGTTATCTTTTCAGGTTATCCTGGTCAACAGAGAGTTAGAGGTGAACAATTGGCCAAATTTGGTCGTCCAGCCAAATTGCGGAGTTCATCTTGGTGGATAAGGTTTTTCGTTCAAACAAGTTTAGAAGAAAATGAAATTACTGGAAAGAAGTTTCAACAAGCTTCAGCCAAGAAGGCATATGCACCAGCTTGCCAAGTTTTCCACCTTAAATCATTCTCCTAA 789 0.417 MSRRPVNPSRRLGDGGSIPFVASIQSKSQNSPLISIGLVIVGAFLLIGYFYSSSGGTSMDIKDVNKLEGGSSCTLEVLQALPVLKKAYGDSMHKVLHVGPDTCTVVSSLLAEEDTEAWGIEPYELDDAGAKCKSLVRKGIVRVADIKFPLPYRPKSFSLVIVSDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENEITGKKFQQASAKKAYAPACQVFHLKSFS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10662 262 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 261 IPR044689 GO:0008168|GO:0045488
Vifa1g10662 262 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 93 232 IPR029063 -
Vifa1g10662 262 Gene3D Vaccinia Virus protein VP39 75 250 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10662 Vifa-Chr1 1792095092 1792097701 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10662 K23871 - gmx:100800870 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10662 1 1792095092 1792097701 Vifa1g10662 1 1792095092 1792097701 ECH