Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10658 ATGAGTTCATTTTCCGTAATGTGTGTCTTGGGATTAATATTTATGATGGTGGGGAATCATGTTGTATATGCACAAGACTCACCAGCAGATTACGTGAACGCCCACAATGCAGCAAGATCGCAGGTTGGTGTTCGGAATATTGTTTGGGACAACACAGTTGCTGCTTTTGCACAAAACTATGCTAATCAACGTAAAGATTGTCGACTGATCCACTCGGGTGGTGGTGGTCGTTACGGGGAGAATCTCGCGATGAGCACCGGAGGCTTGAGTGGCACAGACGCTGTGAGGTTGTGGGTTGATGAGAAACGCGACTATAATTATAATAGTAATTCATGTGCTAATGGTAAAGTGTGTGGCCATTATACTCAAGTTGTTTGGAGAAACTCAGCTCGTCTTGGATGTGCGAAAGTTAGATGTAATAATGGAGGAACATTCGTTACTTGCAACTATGATCCACCTGGTAACTATGTTGGCCAGAAGCCATACTAA 489 0.4376 MSSFSVMCVLGLIFMMVGNHVVYAQDSPADYVNAHNAARSQVGVRNIVWDNTVAAFAQNYANQRKDCRLIHSGGGGRYGENLAMSTGGLSGTDAVRLWVDEKRDYNYNSNSCANGKVCGHYTQVVWRNSARLGCAKVRCNNGGTFVTCNYDPPGNYVGQKPY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10658 162 PRINTS Allergen V5/Tpx-1 family signature 47 65 IPR001283 -
Vifa1g10658 162 PRINTS Allergen V5/Tpx-1 family signature 118 134 IPR001283 -
Vifa1g10658 162 PRINTS Allergen V5/Tpx-1 family signature 145 158 IPR001283 -
Vifa1g10658 162 PRINTS Allergen V5/Tpx-1 family signature 94 107 IPR001283 -
Vifa1g10658 162 CDD CAP_PR-1 28 162 - -
Vifa1g10658 162 SMART SCP_3 26 158 IPR014044 -
Vifa1g10658 162 Pfam Cysteine-rich secretory protein family 32 150 IPR014044 -
Vifa1g10658 162 ProSitePatterns CRISP family signature 1. 119 129 IPR018244 GO:0005576
Vifa1g10658 162 Gene3D CAP 26 162 IPR035940 -
Vifa1g10658 162 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 159 IPR001283 -
Vifa1g10658 162 FunFam Putative pathogenesis-related protein 1 25 162 - -
Vifa1g10658 162 SUPERFAMILY PR-1-like 23 162 IPR035940 -
Vifa1g10658 162 ProSitePatterns CRISP family signature 2. 145 156 IPR018244 GO:0005576
Vifa1g10658 162 PRINTS Venom allergen 5 signature 47 65 IPR002413 -
Vifa1g10658 162 PRINTS Venom allergen 5 signature 92 107 IPR002413 -
Vifa1g10658 162 PRINTS Venom allergen 5 signature 117 136 IPR002413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10658 Vifa-Chr1 1791613649 1791614137 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10658 K13449 - gmx:100805116 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10658 1 1791613649 1791614137 Vifa1g10658 1 1791613649 1791614137 ECH