Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10559 ATGAAATCTCTCAAATTTCTTCTCATTTTCACAACCGTTATTTTCATTGCGTTGGGATTCAAATCCTCTCTTCCATTAGCCACCACTCACCTCCATCTCCTATGGACTTTCTTTCTTCGCTGCTTCACTCCTCCATACCTCTTCTTTACCCTCAACGCCATCATCATCTCCATCCTCGCTTCCTCCAACTTCCACCAATCCCAAACCCAACCAAACCATCCAATTCTCGACCCCACTATTCTCGTCTCAAACACCGTCCTCCTGGACGATTCACCCGCGTCCAAAGATCAAGAAATTCACCAAGTAACGGAAAAAATCGACCTCGGAAATTCGCCACCGATCGATAAACCTCTCGTTTCTTCCAGGTTCATTCACCGGAAGCCTCTTAAATCCACTCCCGAAGGTGGGAAATCGTTGAAGGTGGCCGCGAAGCAAAAACGGCACGAGACGTTGGAGAGCACGTGGAAGGCGATAACGGAGGGCCGGTCAATGCCGTTAAGTAGACACATCAAGAAGTCTGACACGCGGCAATACCGTTATGAAGTTGACCCACATCAACCAGAAGATTCTGTCGGCGATTTCAACTTGAACAAGACTGTGAGGCTGAGAAAAGAACCGTCGCTGAGTCAAGACGAGTTGAATAAACGAGTGGAAGCGTTTATAAGAAACTTCAATCACCAAATGAGGTTGCAAAGAGAAGAATCATTATTGAATCACTACAAGAACAACATTAACCGTGGCGCTATTTAG 750 0.4627 MKSLKFLLIFTTVIFIALGFKSSLPLATTHLHLLWTFFLRCFTPPYLFFTLNAIIISILASSNFHQSQTQPNHPILDPTILVSNTVLLDDSPASKDQEIHQVTEKIDLGNSPPIDKPLVSSRFIHRKPLKSTPEGGKSLKVAAKQKRHETLESTWKAITEGRSMPLSRHIKKSDTRQYRYEVDPHQPEDSVGDFNLNKTVRLRKEPSLSQDELNKRVEAFIRNFNHQMRLQREESLLNHYKNNINRGAI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10559 249 PANTHER COTTON FIBER (DUF761) 30 247 - -
Vifa1g10559 249 Pfam Domain of unknown function (DUF4408) 34 63 IPR025520 -
Vifa1g10559 249 Pfam Cotton fibre expressed protein 210 246 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10559 Vifa-Chr1 1777306283 1777307125 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10559 - - mtr:11434841 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10559 1 1777306283 1777307125 Vifa1g10559 1 1777306283 1777307125 ECH