Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10525 ATGGATTCCAACACCATTCTTGATTATGCTCTGTTTCAACTCACTCCAACCAGAACCAGATTTGAGCTTGTAGTGTTCTGTGGAGGTGTTCGTGAGAAAATAGCTTCTGGGTTGTTTGAACCATTTGTTTCTCATCTCAAATTTGTCAAAGATGAGATCTCCAAAGGCGGTTACTCCATTAGGCTTCTGCCTCCTACCAATACTGCTTTTTGGTTCTCCAAATCCACCTTTGAGAGATTTGTGCGGTTTGTTAGCACACCTGCAGTTCTTGAGAGATTTGTTAGCCTTGAAAAGGAAATTCAGCAGATTGAAAGTCAATTTCAAGCGAACGCATTATCGATGTCGTTAACAATCCCTGAAGAAGGAAACTTGCCACAAACCAATGGCAACACAAGGAGGTTAAGTGATTCTACTAAGTTGGATGATGTACTTGAAGGGGTTGGCATTAAAGAAGAAGAAAACTCAAAGATTTCGCTGCAACGTGTTTTGGACTCTCGAATAGCACTACTCCGAAAAGAGCAAGCAATGGCGTATACACGAAGTCTTGTTGCTGGTTTTGATATTGACAACATCGATGATCTTGTATATTTTGCAAATGCATTTGGAGCATCGCGTTTAAGGGAAGCTTGCAATAATTTTAAGGAGCTGTGGAAGAAAAAGCACGCAGACGATCTGTGGATTCAAGAAGTAGCTGCAATGCAGTCAAGCTTACCGCCAGGACTCTTGTTTTCTGGATCATCAGGAATTATACTTGCAAATGACGTAACCGTTCATGATCAGAATAACAAGAATAATAGCTCTACAGACAGTATTCCTTCGAGCGACGAAAATGCATTTCTTGAAACATCAAATAAAAAAGAAGATGTGAACTTGCCACACATGGCGAATGTTCATATGCCGATGCATATGCCGTGGCCTTACAATGTACCTCCGTATATGTATAATCTTCAAAATCCCGGTCAGCAAATGCCGTCATACCAAGGATATCCTCCTTACCTTCAAAATAATATGCATTGGCCTTCTAACATGGGAGTGAACCAAAAACCGTCAGTGACTAAAAGAGAGAAATCTCGTAATAAGAAAGGATCGGAAGAATATGAAGAACCGGAAACAGATTCCAGTGATCCTGATTCAGGGAGTGAATCTGATTCGGGTAAACAGAAAGACTCAAACAGTTCTTTGAAGGATGATAAGAAGAAAAGACACCGAAGAAAATCGTCTGGAACGGTTGTGATACGTAATATCAACTACATTACTCCGAAAAGGAGAAATGGAAATGAGAGTGGAGGTTCTGATGAATCTTCTTTAGAAGACGATGTTGTCTTCGACGAAGAAACCATCAAACAGAAGGTTGGTGTTGCACTTGAATCATTGCAGAAGGTTCATAAAGGTGAAAAACGTGGTAGTCGAAAAAAGTCAGCAGCTAAACACAACGTAACTAAATCGAGTGATGATGCCGAGGAAGATGCATCCCAAGGTGGGAACAAAAATGAGAACTGGAATGCCTTCCAGAGCCTTTTGAAGATAGATTCCGAGACCGAAGTTGACGGATCAGAACCAACACAATCAATCGATGTCCAGGATGAACATTTTGTGTCGAGCAACTCTGAAGGAAGAATGTCATCTGCTGCTAGTTCTGCTCCAAACATGGATTTCAATGAAGTTCCAAAGAATCGCGAAGTTGTGAATGACTCCTTCATTGTGACTCAAAAAGACGGAGGAAATGGAGGCGGATCGAAGATGGATGGATATGTAGACAACTTCGGCCCAATTACAAAGATCAAAGAAAATATCGGCGAAGATATATTGTTATCACACATATCAAGAGAACCGAGAAATGAACTTGGTGATCCATTAAATACTTATGCTGCTGATTCATCATTACAAACCAAGGGAAGAGGATCGGAAGATTGGTTTATCGTTGATAACAACTTGGAAAGTACGAGAAGCCATGATTCCTCAATTGTGCCTATAGTGTTCGATTCTTCTCATGCTGAAAAAAGAAGCGAAAAAAATATCATCGATGATTCCTTCATGATACACGGTGATCAGTTGGTAGATAACAATCTTTCTGATTCGCAATGGAAGACGGATATGAGTATGGTTGAAAATCTAACATCTTCCAACAGAGAAGAAAGTGACACAAAAGAAAAGACCGCGTTATCAAAGATAGAGGAGCCAAATGATCTCTGTGTAGTTCTGCGACGCGATTCTGGATCGGATTCTGTTGAGGCCTCAAGAACCATGGACTATGAAATCGACTTTTCTTACTCAGAACCTGATAGAAGAACTTCTGTTGATGATTCGAGTGTTGATGCGAATAACAACAATCTTCCAAGTAGTCCAAAGAAAACCAACGCGATTAAAAACAAAGTCTCGCGATTACCTGCAAAGGGAAAGCCCGAAATAATTCCTAGAACCCGAAAACCATCTGTTCCAAGTAGGACTATAGTTCAAAAGAGCCAAAGGGAAAAGGAAGATGAAATTAGGAAGAAGTTGGAAGAAAAGGCGAATGAACGACAGAGGAGAATAGCCGAAAGAACTGCATCTTCTGGTGTTGTTCGAGCCGTGCCGGGGAAAACCGATAAAAACAAGACTCAAACTGTTAAAGAGACAAAGAGAATCAGTTCTGTTAAGAAAATTTAG 2646 0.4051 MDSNTILDYALFQLTPTRTRFELVVFCGGVREKIASGLFEPFVSHLKFVKDEISKGGYSIRLLPPTNTAFWFSKSTFERFVRFVSTPAVLERFVSLEKEIQQIESQFQANALSMSLTIPEEGNLPQTNGNTRRLSDSTKLDDVLEGVGIKEEENSKISLQRVLDSRIALLRKEQAMAYTRSLVAGFDIDNIDDLVYFANAFGASRLREACNNFKELWKKKHADDLWIQEVAAMQSSLPPGLLFSGSSGIILANDVTVHDQNNKNNSSTDSIPSSDENAFLETSNKKEDVNLPHMANVHMPMHMPWPYNVPPYMYNLQNPGQQMPSYQGYPPYLQNNMHWPSNMGVNQKPSVTKREKSRNKKGSEEYEEPETDSSDPDSGSESDSGKQKDSNSSLKDDKKKRHRRKSSGTVVIRNINYITPKRRNGNESGGSDESSLEDDVVFDEETIKQKVGVALESLQKVHKGEKRGSRKKSAAKHNVTKSSDDAEEDASQGGNKNENWNAFQSLLKIDSETEVDGSEPTQSIDVQDEHFVSSNSEGRMSSAASSAPNMDFNEVPKNREVVNDSFIVTQKDGGNGGGSKMDGYVDNFGPITKIKENIGEDILLSHISREPRNELGDPLNTYAADSSLQTKGRGSEDWFIVDNNLESTRSHDSSIVPIVFDSSHAEKRSEKNIIDDSFMIHGDQLVDNNLSDSQWKTDMSMVENLTSSNREESDTKEKTALSKIEEPNDLCVVLRRDSGSDSVEASRTMDYEIDFSYSEPDRRTSVDDSSVDANNNNLPSSPKKTNAIKNKVSRLPAKGKPEIIPRTRKPSVPSRTIVQKSQREKEDEIRKKLEEKANERQRRIAERTASSGVVRAVPGKTDKNKTQTVKETKRISSVKKI 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10525 881 MobiDBLite consensus disorder prediction 457 558 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 516 552 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 477 492 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 769 785 - -
Vifa1g10525 881 Coils Coil 819 843 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 351 367 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 493 508 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 409 431 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 798 881 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 819 846 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 759 785 - -
Vifa1g10525 881 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 871 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 379 396 - -
Vifa1g10525 881 MobiDBLite consensus disorder prediction 337 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10525 Vifa-Chr1 1766344383 1766348597 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10525 - - ccaj:109803488 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10525 1 1766344383 1766348597 Vifa1g10525 1 1766344383 1766348597 ECH