Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10470 ATGGACATTTCCGTCAATTCCTTATTCACATTCATCTTCTTCTTCTTCTTCACCTTCGTAGCTTCTAACCCTTCCGATTCATCTTTCCAAACCACCTACAACCGTCTCTGCAATGACATCGTCCCCGTCCCCGCCTCCGCCTCCTCGCCGCCGTCCGACACTCCAACCACCTCCGCCATCGCCCAATCTCTCTACTTCCAATCCGGTTACTTCTCCGGCGGCGATCCACTTTTCAACCTATCCCCCGACTCTAGCTTCTACAAACACGTCTCGTTCCATGTCACCTCCGCCCGGAGAATCCCAACCGACAGTACAAGCGACGGCGTATATCAATTGCTAGGGAAATTGAATCTCCGGCAACGAGCGAGAGTCCGGTCCAATCCGACGAGGGTTTATCCGGGACCTAGGGTTCCGCTGAGGATGCGTGTTCCTTCTCTGAAAGGTTTTTGGTCACAATCTTCTGGTAAGCTTTGTATGTTTGGAAGAGGATCTTATGGTAGTAGAAACAATCTCAGAGATGTTAATGTTGTTATTAAGCTTCGTTACCCGAATCGTGTTACGCTTTTGGATAGTTTGATTACTGGAACTGTTGAAAGTTTTGATGAAATTAATAGCTTGCATTATTTTGAACCTGTTTCAATGTTGACTGTATCTCAGAGTTCGAATTATAATTTTACAATGGCTGGGAACAACGATGATAGTCGTTGTGTAGCGGGATCTGGATCGAATGAGGAAAGTTTGAGCCTTGGAAATTTGAAACAAGGGGTCTGTCCTGGGTTTCTCGATCATGTGGATAGCTTTCATCTTGAATATGGGAGTCACTGTAATAATGTTAGTTGCAATCCCTTTGGTGGTGAAAAGTTGCTTGGTTTCATGGGTTTGTACACAACTCGGTGCGTAGAGAGGGGGAAGATTCAGATGTTGTTGGATTTTCATGATACGGAATATCGTGAGTGGTTGCTTCTGTCTCGTCCGAATACAACATTGATATCTGAGGGGGTGTGGGACGAGAAGGAGAATCGGCTTTGTGCAGTTGCGTGTCGGATTTTGAACATCACAGGGTCTCCTTATGTTGGAGATTGTTCGATTAAGCTTACGTTAAGGTTTCCTGCTGTGTTGTCTTTAAGAAATAGGAGTACTGCTTTGGGCCGGATATGGAGTGATAAGCTTGTTGGTGAATCTGGCTACTTCGGCAGCGTGGGATTTGAAAGTATCTTGAGGAGATCAGGAAGTTCGCCTGATGGTTTACAGTACAAGTATACTGAAATTGACAGAGTAAGAAAGTCTTGTGCCGAAAAGGTGACTGCTAGAGGAAAAGGAAAGAACTATCCAGATGTATATTCTTCTGATATAGCATTTAGCATGGTTGTGACAGACAACAAAGGGCGAGTAACTCAAGGTTTCTCATTACCATTGTTTGTTGGTGATCAAAGTTATGAAGGGCGGCCTCATGGGGTTCCATTTCTTCCGACGAATGGTGGAAACTTGAAAGCACATGGTTTTCAAAACAGCAATTCATTGAATGTCAGCTATGCATTTTTCCTTAAGCCTTCTGATGTTATGTTTGGTAATGAGGTCTCATCAACAGAAATCAAAATTAGTGCTGAAGGATTATACAACAGAAACACTGGAGTAATGTGTCTGATAGGGTGTCGGCATTTGAGAACAAATAACAAATTACTGACGAAGAATGAGTCTCTGGACTGTGAAATCATGATTAATGTCCAGTTTCCTCCATTGAATGCAAAAGTAGGTGAACCTGTTGAAGGGACTATAGAAAGCACGCGACAAAAGACAGATTCTTACTATTTTGAACCCCTTCAGTTGTCTTCAGATTCGTTAACCAAACGAGAAGCAGACGCATCCATTTGGAGAATGGACCTTGAGATCATTATGGTAATGATATCTAACACACTTGCTTGTGTGTTTGTAGGATTGCAACTCCTCCATGTGAAAAAGCACGCAGAAGCACTTCCTCACATTTCCATTGTGATGCTTCTATTCATTACTCTAGGTCACATGGTTCCCCTGATGCTGAACTTTGAAGCCTTATTCAAGGTGAATCACAATAGTGTGCAGGATGCTTTTCTTGGGAGTGGAGGCTGGCTTCAAGTGAAGGAAGTAGTTGTGAGAATGGTGACAATGGTAGCTTTTCTTCTAGAGTTGCGTCTTCTACAATTGACATGGTCTTCAAGACAGACTGAAGAAAGCCAGACACAGACGGGTTTGTGGGTTTCTGAAAAATGGGTTCTATTCATTATTCTACCATTGTATTTTACCGGTGGATTAACTGCATGGTTCGTGCACATATGGAAGAATTATCGCCAGAAAAGCTCTCGACCCTTCCGTCTTTCTCGCCACAAGTTTAAAACTCCTCGTCAACATTTTAATCAACTGCCATCACTCTGGGAAGATATGAAATCTTATGCTGGTTTACTCCTAGACGGGTTTTTGCTCCCACAAATTATGTTCAACATATTGTCAAACTCAGAAGAAAAACCATTGGCATCTTTGTTTTATTTTGGAACAACCATTGTTCGCATACTGCCCCATGCATATGATCTTTATAGAGCTCACAGCTCTGCATGGCACCTTGTTGTATGCTTACAGCAAAGATTTGGCAGCCGATGTTTTCTTCCAAAGAGGTTCAGGGGAACTTCTGCATATGAGAAAGTACCTGTTATTGGTAATGACGATTTGTGA 2703 0.4292 MDISVNSLFTFIFFFFFTFVASNPSDSSFQTTYNRLCNDIVPVPASASSPPSDTPTTSAIAQSLYFQSGYFSGGDPLFNLSPDSSFYKHVSFHVTSARRIPTDSTSDGVYQLLGKLNLRQRARVRSNPTRVYPGPRVPLRMRVPSLKGFWSQSSGKLCMFGRGSYGSRNNLRDVNVVIKLRYPNRVTLLDSLITGTVESFDEINSLHYFEPVSMLTVSQSSNYNFTMAGNNDDSRCVAGSGSNEESLSLGNLKQGVCPGFLDHVDSFHLEYGSHCNNVSCNPFGGEKLLGFMGLYTTRCVERGKIQMLLDFHDTEYREWLLLSRPNTTLISEGVWDEKENRLCAVACRILNITGSPYVGDCSIKLTLRFPAVLSLRNRSTALGRIWSDKLVGESGYFGSVGFESILRRSGSSPDGLQYKYTEIDRVRKSCAEKVTARGKGKNYPDVYSSDIAFSMVVTDNKGRVTQGFSLPLFVGDQSYEGRPHGVPFLPTNGGNLKAHGFQNSNSLNVSYAFFLKPSDVMFGNEVSSTEIKISAEGLYNRNTGVMCLIGCRHLRTNNKLLTKNESLDCEIMINVQFPPLNAKVGEPVEGTIESTRQKTDSYYFEPLQLSSDSLTKREADASIWRMDLEIIMVMISNTLACVFVGLQLLHVKKHAEALPHISIVMLLFITLGHMVPLMLNFEALFKVNHNSVQDAFLGSGGWLQVKEVVVRMVTMVAFLLELRLLQLTWSSRQTEESQTQTGLWVSEKWVLFIILPLYFTGGLTAWFVHIWKNYRQKSSRPFRLSRHKFKTPRQHFNQLPSLWEDMKSYAGLLLDGFLLPQIMFNILSNSEEKPLASLFYFGTTIVRILPHAYDLYRAHSSAWHLVVCLQQRFGSRCFLPKRFRGTSAYEKVPVIGNDDL 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10470 900 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 6 864 IPR021319 -
Vifa1g10470 900 Pfam Protein of unknown function (DUF2921) 35 864 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10470 Vifa-Chr1 1755427988 1755430783 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10470 - - aprc:113848765 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10470 1 1755427988 1755430783 Vifa1g10470 1 1755427988 1755430783 ECH