Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10457 ATGGATTCCATTTCCATGAGATACCAAGAAGATCAAAAGTCACCATCTTCTCTCCCTTCCCCCAAAACTCAAACCCCTTCCCCAAGACCCATAACAAGATCCGAACCCGGTAACTCATACCCAACAACGTTCGTTCAAGCAGACACAACCTCTTTCAAACAAGTAGTTCAAATGTTAACCGGTTCCTCGGAAACATCAAAACAAGCTTCTTCTTCTTCTTCCAAACCAAACCACAACATTCCTCCAATCAACTCCATACCTAAAAAACAACAACAATCTGGTTTCAAACTCTACGAAAGAAGAAACTCACTTCATAAAAACCTCAACATCAACCCTTTATTACCCATTTTCTCCTCCACCTCGAACAACATCAACAACTTCAACAACAACAACAACAGCAACAGCAACAACACATCTTTCTCACCTCGTACTAAACAAGAGATCTTGTCACCTAGTATCCTAGATTTTCCTTCTCTTGTTCTCAGCCCGGTTACACCTCTTATACCCGACCCGTTTGACCGATCCGGATCAACTAGAAGCTCTTGCTTGAACGCGGAAGCTGAAGACAAAGCGATTAAAGAGAAAGGATTCTTTTTACATCCTTCACCAGTTTCAACTCCGAGAGATTCTGAACCTCGTTTGCTTCCTCTTTTTCCTACGACTTCTCCTAGGGGTTCAGGTCCTTATTCTGCATCTTGA 699 0.4235 MDSISMRYQEDQKSPSSLPSPKTQTPSPRPITRSEPGNSYPTTFVQADTTSFKQVVQMLTGSSETSKQASSSSSKPNHNIPPINSIPKKQQQSGFKLYERRNSLHKNLNINPLLPIFSSTSNNINNFNNNNNSNSNNTSFSPRTKQEILSPSILDFPSLVLSPVTPLIPDPFDRSGSTRSSCLNAEAEDKAIKEKGFFLHPSPVSTPRDSEPRLLPLFPTTSPRGSGPYSAS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10457 232 MobiDBLite consensus disorder prediction 196 232 - -
Vifa1g10457 232 Pfam VQ motif 40 65 IPR008889 -
Vifa1g10457 232 MobiDBLite consensus disorder prediction 1 20 - -
Vifa1g10457 232 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 20 226 IPR039611 -
Vifa1g10457 232 MobiDBLite consensus disorder prediction 27 94 - -
Vifa1g10457 232 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10457 Vifa-Chr1 1750788220 1750788918 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10457 - - mtr:11438828 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10457 1 1750788220 1750788918 Vifa1g10457 1 1750788220 1750788918 ECH