Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10236 ATGGAACCATTAGCATCAATCTACGAACACGAAAACGATGACATATTTACCGAAGCACTTCACCTCTGTTCCGTCGATTCAATCCCGGAAACTTCCACCTCCGATTCCACCCTTTCACATTCTAAACCCATCTCCTCCGAACCTCACGATCCCCATTCCAACCCACCCTCTCCCTCTCCGGCCACCACACTCCGCCGCCGCTCAATTCGTCTCAGAAACAACCAATCTTCCGATTCCACCATCAATACCGATTCGACCAATGTCACAAAAAGAAGCTTCCGACATCACCCAAGGGACATGAATCTCAAACAAGATGAGAATTTTACCACGAAACCCTATCCCGATGAAGCGAACAACGAGGACTCCACCGTAACTACAGCTACGAATGATGCTGAACACGACGATTCCGCTGTTTCGGCTTTGCGAATCACCGATTCGAACTCGAGTTTTCTCGAATTGATAGTAGGTGGGTTTTTGATGAAGTGTTTCGTGGAGAAGCCAATTCAGATGAAGGAGGTTTTGAATTTTGATTATACTAAGCTTAGTCCGGTAGCTTATGTTCCTATAATATCATGTGATGGTGTTGTTGGTGGGAAAGATTCGGAGAATAATGTTCAAGTTGGGAAGTTGGCGATGATGGGTGAACGGGTTATACCTTTGAAACACAAAGTACAAGTTACGGTTTCTTTGAGAGTGCCCGAGTCGGGATACAACAGAAATCTTGGAATCTTTCAGGCCAGGGTGGATTTTCTGCTGTCTAGTGGTAAAAAGATTGCAAGTTTGAGTCAACCTTGCATGTTAAGGTTCAAAAGTGAACCTATTCGCCTAATCACGACTTTCCTCAAGATTGCTCCTCTCATTACTGGCTATACATCTGAAACCCAGATTCTGAATGTCAGGATGAGAGGGTACGTTGAAGGGAATATACCTACTTCGTGCTTGAGAGTGACACTCGAGCAACGACCAGAGTATCAACCGGGTGCTGGCATTCCTCAAATATATGATGCATCTCTTGTTGTCGAGTCTGAACTTCCTTTTTTCAAAAGGATCATTTGGCATTGGAAGATGAGCATATTTATTTGGATTGCAATGATGTCGCTCTTCACAGAGTTGATTTTTGTTCTAGTATTTTGTAGGCCTATAATAATTCCAAGAACAAGGCAAAGGGTAGCGGCATCTGCTCTTGGTCCTGCAACTTCAGCCAGTCTTCAGGCACAAAGTTGA 1224 0.4428 MEPLASIYEHENDDIFTEALHLCSVDSIPETSTSDSTLSHSKPISSEPHDPHSNPPSPSPATTLRRRSIRLRNNQSSDSTINTDSTNVTKRSFRHHPRDMNLKQDENFTTKPYPDEANNEDSTVTTATNDAEHDDSAVSALRITDSNSSFLELIVGGFLMKCFVEKPIQMKEVLNFDYTKLSPVAYVPIISCDGVVGGKDSENNVQVGKLAMMGERVIPLKHKVQVTVSLRVPESGYNRNLGIFQARVDFLLSSGKKIASLSQPCMLRFKSEPIRLITTFLKIAPLITGYTSETQILNVRMRGYVEGNIPTSCLRVTLEQRPEYQPGAGIPQIYDASLVVESELPFFKRIIWHWKMSIFIWIAMMSLFTELIFVLVFCRPIIIPRTRQRVAASALGPATSASLQAQS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10236 407 MobiDBLite consensus disorder prediction 29 44 - -
Vifa1g10236 407 Pfam Putative adipose-regulatory protein (Seipin) 153 365 IPR009617 GO:0019915
Vifa1g10236 407 MobiDBLite consensus disorder prediction 89 105 - -
Vifa1g10236 407 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 152 393 IPR009617 GO:0019915
Vifa1g10236 407 MobiDBLite consensus disorder prediction 29 127 - -
Vifa1g10236 407 MobiDBLite consensus disorder prediction 106 127 - -
Vifa1g10236 407 MobiDBLite consensus disorder prediction 59 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10236 Vifa-Chr1 1703727893 1703730145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10236 K19365 - gmx:100796452 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10236 1 1703727893 1703730145 Vifa1g10236 1 1703727893 1703730145 ECH
Vifa1g10236 1 1703727893 1703730145 Vifa1g10236 1 1703727893 1703730145 PCT