Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09960 ATGTCTATGAACCTTTCTTTGTTCATGGCTTCCTCCGCCGATCATTCCCTTACTCAAGAGACACAGAAACATCGAAATTCAAACACCGCCTTTGCTCTTCGCCGAAGAAGTACTCATACCAAATATTATGGTTATAGCTCACCTGTGAATTTCAGACAAGGTTTCGTGAAAAATGAGGTTTCTGCCAGGAAGCTCGCAGCTGGTTTGTGGCAGTTGCGGTTTGTTGAGGTCTCTGGTGAGTGCGGCGAAGATGTTATCCGTGATGGGTCATTTCGATCTTCAAAATTTAAGCTTGAAGCCTATAAGCCATTGATCAAATCTTCAAAAGAAAAAGAAACAGAATGGAGCCATTTAGTCAATAAAGGATCCAATGAGTCTACAATAGCTCATTGGAGGAAGCTTCTAGACGAGAGAAAATTAGTTGATGATCAACATGACTCGATTGTCACCGTTCTTCTCGAAGAACTCCTTCGATCACAAAGGATGGTTAGAAAATTTAAAGCCGAAAAGAATTCCTCTAAGAAAAAAGCTAGAGAGGAAAATGTGTTATGGAAATGCAAAGAACAGAAGAAGATTGAAAAAAAGTTAGATGAGTTAGAGGATAGGTTGATAAAGGAGAGAAGAAGTAGAGAGAAGATGGAGATTTTGAATACCAAATTGTTGAAGGAATTGGACAAGGCGAACGAATGCATTGATCGGTTTAGGAAAAACTACGAAAAGGAAAAGAGAAAAAGAGAATTAACCGAAAAAGTGTGTGGTGAATTGAACAATCAAATAGAAGAAGACAAAGGTGAGATTGAGAAGCTAATGAGGGAAGCAATGAAACTTTACAAGGAAGTTGAAGAAGAGAGGGAGATGGTGAAAATGGTCGAGCTATGGCGCGAAGAACGCGTGCAAATGAAGCTAGATGACGCGAAGAATCTTATCGAAGAGAAATATAATCAAATGGTGGAGTTGATTGCTTATCTACGAAGGTTTCTAAGATCAAAAGGCGACCAAGTTAGCAACGATGAAATAGAGGATGCTCGGTTGATTGAACAGGTGGTTGAATCGGTTAACATTGGACAAATTCTGGAACTTTCTTATAATTTCTCTAAATCAGATGATGTATTTCCAATCTATGAGGAATGTAGTGAAGAAACTGGCAAGTTATATCCTTCTCCTGCCTCTAATCAACTAAGATTGATTCGCAACGACGAAAAAGCAATTTCTGTCACAAAATATTCTCAAGATGGAATGGATTGTCATGGTTGGTACAAACAAAAGGAGTGCAACATGATTGGTGAAGATTCTATTGAAGGTAGCTTCAAACACTTTGAATTATTGGGACAAGGAAACTCAAGAGATAGCAATAACCCTCACATAACTCGTGGGATGAAAGGATGCATAGAATGGCCAAAAGGTATTAAAACTAATTCCAAAGTTATTATTCCTTTGGAAGAAAGAGTGAAAAGCCAGAAATCTCAGTTGCAACACATTCTTAAGCCAAAGGCTTTTTAA 1500 0.3833 MSMNLSLFMASSADHSLTQETQKHRNSNTAFALRRRSTHTKYYGYSSPVNFRQGFVKNEVSARKLAAGLWQLRFVEVSGECGEDVIRDGSFRSSKFKLEAYKPLIKSSKEKETEWSHLVNKGSNESTIAHWRKLLDERKLVDDQHDSIVTVLLEELLRSQRMVRKFKAEKNSSKKKAREENVLWKCKEQKKIEKKLDELEDRLIKERRSREKMEILNTKLLKELDKANECIDRFRKNYEKEKRKRELTEKVCGELNNQIEEDKGEIEKLMREAMKLYKEVEEEREMVKMVELWREERVQMKLDDAKNLIEEKYNQMVELIAYLRRFLRSKGDQVSNDEIEDARLIEQVVESVNIGQILELSYNFSKSDDVFPIYEECSEETGKLYPSPASNQLRLIRNDEKAISVTKYSQDGMDCHGWYKQKECNMIGEDSIEGSFKHFELLGQGNSRDSNNPHITRGMKGCIEWPKGIKTNSKVIIPLEERVKSQKSQLQHILKPKAF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09960 499 Coils Coil 189 286 - -
Vifa1g09960 499 Coils Coil 295 315 - -
Vifa1g09960 499 PANTHER GB|AAF24581.1 26 450 IPR043424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09960 Vifa-Chr1 1633335247 1633336932 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09960 - - mtr:25486144 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09960 1 1633335247 1633336932 Vifa1g09960 1 1633335247 1633336932 ECH