Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09928 ATGGTTTGTCTACAAATATTCTCAGCGGCTAATTTATCTTCTTCTTCTTTGAAGACAGTTAATGCCGCTATCCATATCCCTAAACTCCCACGTGTATTCTCAATCCCACAACTATCAAAGACAAAGCCCCTTCTTGAGGACTTTATTAATGTATCCAGACATCGTATTAATACAGATCAATTAGAAAAGAATAGTGTTGTCCTCACCACACAATCACACCACAGGAGTACAAATGATATTATTATTATTAAACTCTATGCAGTCTTGGAAGCTGTTTCCGACAGAGTTGAAATGCATCACAACATTGCTCAACAACGGAACAATTGGAACACTCTTTTGTTAAACTCTATCAACATGATTACTCTTACTGCTACGACTTTGGCTGGTGTTGCTTCTGCTGCTGCAACCACTTGCTCTGATTCTTTACTTTTGGCTTTGAAACTATCTTCTGCTCTTTTATTCTCTGCTGCAACTGGTTTATTGCTTATCATCAACAAAATTAACCCTTCTCAACTCACGGAGGAACAACGAAATGCAACAAGATTGTTTAAACAGCTTCAACGACAAATCCAAACCACTATTGCAATAGGAAATCCTAGTGAGGAAGATGTCAAAGATGCAATGGATAAGGTTTTGGCACTTGACAAAGCTTACCCACTTCCATTATTAGGAGCAATGCTTGAAAAATATCCCGCAAAATTTGAGCCTGCTGTTTGGTGGCCTTCCAACAAAGGAAAACCACAAAGCAAGAAAATGGGGAAAAAGAAAAATGGATGGAGTGAAGAATTAGAAATGGAAATGCGGGAAGTTGTTGAAGTGATAAAGAGAAAAGATGCCGAAGATTATAACAGACTTGGAAACATAGCGTTGAAGATAAACAAGAGTTTGGCAATTGCAGGTCCATTACTCACAGGCATTGCAGCTGTTGGATCTACATTTATAGGCAATAATGGTAGTTCTTTGGCTGCTTTTGTTCCTCTCATGGCTGGTTCATTGGCTGCTGCAATTAATACTTTCGAACACGGTGGCCAAGTTGGCATGGTTTTTGAAATGTATAGAGGTTCTGCTGGTTTCTTCAAGTTGTTAGAAACCTCAATAGAATCAACTTTAAGTGAGAAAGATTTAGAGAAAAGAGAAAATGGAGAGTTGTTTGAAATGAAGATGGCTCTGAAGTTGGGAAGAAGTATATCAAATCTGAGGGAACTTGCATCAAAATCAGCTTCTTATAGAATGGAAGGTGTGGGTGACATGGGTGAATTTGCCAGCAAACTCTTCTAA 1278 0.385 MVCLQIFSAANLSSSSLKTVNAAIHIPKLPRVFSIPQLSKTKPLLEDFINVSRHRINTDQLEKNSVVLTTQSHHRSTNDIIIIKLYAVLEAVSDRVEMHHNIAQQRNNWNTLLLNSINMITLTATTLAGVASAAATTCSDSLLLALKLSSALLFSAATGLLLIINKINPSQLTEEQRNATRLFKQLQRQIQTTIAIGNPSEEDVKDAMDKVLALDKAYPLPLLGAMLEKYPAKFEPAVWWPSNKGKPQSKKMGKKKNGWSEELEMEMREVVEVIKRKDAEDYNRLGNIALKINKSLAIAGPLLTGIAAVGSTFIGNNGSSLAAFVPLMAGSLAAAINTFEHGGQVGMVFEMYRGSAGFFKLLETSIESTLSEKDLEKRENGELFEMKMALKLGRSISNLRELASKSASYRMEGVGDMGEFASKLF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09928 425 Coils Coil 260 280 - -
Vifa1g09928 425 Pfam Petal formation-expressed 84 400 IPR027949 -
Vifa1g09928 425 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 11 425 IPR027949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09928 Vifa-Chr1 1623623641 1623624918 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09928 - - gmx:100797519 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09928 1 1623623641 1623624918 Vifa1g09928 1 1623623641 1623624918 ECH
Vifa4g04824 4 1521863462 1521864709 Vifa1g09928 1 1623623641 1623624918 PCT