Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09846 ATGGATGAAGAAATCAACAATTTCATGATGGTATGGATGATAGCTGCATCAACAATGTTCTATTGCCACACAATTGGCAACCATATCTCTCATGGCACACCAAGGCTCATAGCTCTTATCCCTGCCATAATCATTCTCTTTCTCCTCCCTCTAAGACTCACCTCAATCCACCTTGGAGGTCCCTCTTCTTTCTTCCTAGGTTGGCTTTCCACCTTCAAACTCTTCCTCTTTGCCTTCAACAAAGGTCCTCTCTCAACTAACCCTCCTCTCTCTTTACTTCACTTCATCTCCTTAGCATGTCTTCCCATCAAATTCCAACACCAAACCAATAATAACTCTACAAAAAACCACAAATCAAAATCAAAGCCATCACTTAGGTACTCATATGTAACTATTATTATCTTACTAGCTTTATTAATTCCACTATATAGTAAAAAAGAAAACTTCCATCCAAAATTTGTTTCTTTACTATACGCCCTCTACATGTATATTGGTCTTGAATTTTTATTTGCTTTGGCCTCAACTTTTACTACAAAGCTTCTAAGTGTTGAGTTAGAGCCACAATTTGATAAACCATATCTAAGCACTTCACTTCAAGAATTTTGGGGGAAAAGATGGAACATTACGGTGAACCGCGTACTACACCCCACCGTATACGAACCAGTGATGATTTTTTGCAGCTGTTGGATTGGAAGAAAGTGGGCCCCATTACCCGCGATTCTCGCTACTTTCACCATGTCGGCTATAATGCATGAAGTTGTTTTTTATCACATCAAAAGAGAGAAACGAACGTGGGAAACATGGGAACCCTCGTGGGATGCAACGTGCTTTTTCATTTTACATGGGTTGTGTTTGGCTGTTCAAGTTGCGGTTAAAAAAGTTTTGAGAGAGAAAGTGCGGTTGCCGAAGGTGGTTTCGTGGTTGCTCACGGTGGTGTTCGTGATGTATACGACGCTGTGGCTGTTTGTGCCGGCGCTTGTACGGTGTCGTGTTTATGAAAAGGCAGCCAGAGAGTTGAATGCTTTAAATGAGTTTTTGAATGACGTGTATGATGTTGTAAGGGTTGGTTTTTTATGGGCAGCTACTAGATTATCCCTCCTATAG 1104 0.4094 MDEEINNFMMVWMIAASTMFYCHTIGNHISHGTPRLIALIPAIIILFLLPLRLTSIHLGGPSSFFLGWLSTFKLFLFAFNKGPLSTNPPLSLLHFISLACLPIKFQHQTNNNSTKNHKSKSKPSLRYSYVTIIILLALLIPLYSKKENFHPKFVSLLYALYMYIGLEFLFALASTFTTKLLSVELEPQFDKPYLSTSLQEFWGKRWNITVNRVLHPTVYEPVMIFCSCWIGRKWAPLPAILATFTMSAIMHEVVFYHIKREKRTWETWEPSWDATCFFILHGLCLAVQVAVKKVLREKVRLPKVVSWLLTVVFVMYTTLWLFVPALVRCRVYEKAARELNALNEFLNDVYDVVRVGFLWAATRLSLL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09846 367 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 3 349 IPR044851 GO:0006629|GO:0008374
Vifa1g09846 367 Pfam Membrane bound O-acyl transferase family 186 279 IPR032805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09846 Vifa-Chr1 1603687421 1603688524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09846 7 349 Miscellaneous Gene Families AT3G51970 38.372 4.38e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09846 - - cam:101493450 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09846 1 1603687421 1603688524 Vifa1g09846 1 1603687421 1603688524 ECH