Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09804 ATGTCTAGTGATGAGATTGATCCTGTTTTTGTGGCATGGGAGGAGCAAGTGATATGTCAAGAGCGTGGGAACCGAGTGATTCATTTTTACTTGAAACATGTGTCTGGGAATTCTGTGCTGGCTGTTGTTGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTTCCTCAACAGTTTTTGCAGGCTTATGGATCTATCAACGTTACTTATAAATGGAGGGCGAGGAGGGAGGTTGTGGATTGGCTTAACCATTTGGTTTTGAAGAATCAATTGCGTCGTGCGGATGCAATGCTGGATGGTTCAGAAAAAGCTCTAGGATCGGGATCTTTTGATATGTATGCTAATAACAGAAAAATACCCGATAAACAGATTTCTAAGAAGCTGAACTTTCAAAGCTCGAATATTGAATGGTCAGGCACTGCTTGGTTTTGTGCTAAATCGCTGAAGCACTACTCTGGGTTTGACAGGAAAGGCACAACCATATATGTTCATTCATTTGTATATATTATGGCTGAAGATGAAAATCCCTATCTTGGTTACTTGGAAGATATGTATGAAGACAAAAAGAAACAAAAAAGGGTCAAGGTACGGTGGTTTCACCGTGGCCAGGAGGTTAAGCATGTGATTCCAGACCTTGATCTTGAAGAGGGTGAAGTTTTCATCACACCTAATGTTCAGGTGATCAGTGCCGAGTGCGTCAATGGGCCTGCAACAGTTCTGACTCCTAAGCATTATGAAAAATACAAAGCTGAGTTGCTGCCGCATACCTCTTTACCCGAGATACATATATGCTTTCGGCAGCTTAAAAACAATAAGCTCAAACCCTTTGCACTTACTAAGCTGCGCGGTTATAGTAACCAGCCTATACTTTCGGATTTGAACAGCCCTAGCCCTACTCCTTCCAAAAGGAAGACGAACTATCCAAAATTGGAAGATGGTGAGAACTTCACTCAAGATGATCCTTTGAGGTACAGCAACAAGAGAGATAGAAGTTCTGTGGAGTATTCGGTACCTGATAATGGTTTGTCTGGTCTTCAATACTCTTCTCCTATGAATGAGATGTCAAAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTACAATCTTGTATGCATCTCAGAAGAAGCTGAAGGTCCAGTATGATGACCTGATGGACGCTGATGATGAAGGCCTACTCGAGGAATGGCTCCCTGCATCTAGAGTGGCAAATCCTGACAAACTGGGCATGCGCTGTTACGGCCGTTTAACAGTACGACCACGCCCTCCTGAGTTTTCTAAAGGTTGTACATTTGAGGTTGGAGCAGCAGTGGATGCCTGGTGTGGTGACGGATGGTGGGAAAGCGTTATAACTGCTGTCAATGTTTCTGAAGCTGAAACTTATCAGCTGTATTCCCCTGGTGAAGAGAAGTATATGTCGGCTAAGAAGGACAACATTCGGATTGCCCAAGACTGGATCGATGACAAGTGGGTTGATATATTGGGAAAACCCGACATTTGCAGCATTATAGCTTCAAACTCTGGTTCCCAGACCAAGTTGTCATCTAACTCTGCGGTGGTCGAAGGATCAATGACTGGCAGTTCTGCAACATTAGAAAGCCCGTCGCCAGTTGCCAGAGTTGAAGTTACTCCTAAGGTTGAGCAAGAATCATCTGGTTCTGAACCATTTCATTATGGCGGAATGAAGAGATTGACTTTGTGGAAACCACCGCTCCATGCCATTCATGAAGATGAGGATATCGACCCTTCTGGCTTTGATGCTGATACCGACGAAGCTGATGATGAATTACTCAAATCCAAGGATGACTCTGGTAGTAGCAGCGACGATGACGGTGGTGATGGTGATGGCACTGACAATGACGGTGATGATGATGCTGACAACTCTGGAGACGACAGCGAGGATAATTTCTCGATGGATGAAAAATTTGATTGTTCTGAACCAAAACTCGATGCAGCAGGAGCGATACATGATACATGA 1980 0.4409 MSSDEIDPVFVAWEEQVICQERGNRVIHFYLKHVSGNSVLAVVGTERSVRHMMYVVPQQFLQAYGSINVTYKWRARREVVDWLNHLVLKNQLRRADAMLDGSEKALGSGSFDMYANNRKIPDKQISKKLNFQSSNIEWSGTAWFCAKSLKHYSGFDRKGTTIYVHSFVYIMAEDENPYLGYLEDMYEDKKKQKRVKVRWFHRGQEVKHVIPDLDLEEGEVFITPNVQVISAECVNGPATVLTPKHYEKYKAELLPHTSLPEIHICFRQLKNNKLKPFALTKLRGYSNQPILSDLNSPSPTPSKRKTNYPKLEDGENFTQDDPLRYSNKRDRSSVEYSVPDNGLSGLQYSSPMNEMSKDSGIRGCWFRCTILYASQKKLKVQYDDLMDADDEGLLEEWLPASRVANPDKLGMRCYGRLTVRPRPPEFSKGCTFEVGAAVDAWCGDGWWESVITAVNVSEAETYQLYSPGEEKYMSAKKDNIRIAQDWIDDKWVDILGKPDICSIIASNSGSQTKLSSNSAVVEGSMTGSSATLESPSPVARVEVTPKVEQESSGSEPFHYGGMKRLTLWKPPLHAIHEDEDIDPSGFDADTDEADDELLKSKDDSGSSSDDDGGDGDGTDNDGDDDADNSGDDSEDNFSMDEKFDCSEPKLDAAGAIHDT 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09804 659 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 355 549 - -
Vifa1g09804 659 Pfam Agenet domain 356 424 IPR008395 -
Vifa1g09804 659 MobiDBLite consensus disorder prediction 289 305 - -
Vifa1g09804 659 MobiDBLite consensus disorder prediction 525 560 - -
Vifa1g09804 659 SMART BAH_4 160 280 IPR001025 GO:0003682
Vifa1g09804 659 MobiDBLite consensus disorder prediction 609 634 - -
Vifa1g09804 659 SMART agenet_At_2 430 488 IPR014002 -
Vifa1g09804 659 MobiDBLite consensus disorder prediction 635 659 - -
Vifa1g09804 659 ProSiteProfiles BAH domain profile. 160 280 IPR001025 GO:0003682
Vifa1g09804 659 MobiDBLite consensus disorder prediction 594 608 - -
Vifa1g09804 659 MobiDBLite consensus disorder prediction 289 338 - -
Vifa1g09804 659 MobiDBLite consensus disorder prediction 306 335 - -
Vifa1g09804 659 Pfam BAH domain 161 253 IPR001025 GO:0003682
Vifa1g09804 659 Gene3D - 127 275 IPR043151 -
Vifa1g09804 659 MobiDBLite consensus disorder prediction 578 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09804 Vifa-Chr1 1592694329 1592699499 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09804 - - gmx:100816046 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09804 1 1592694329 1592699499 Vifa1g09804 1 1592694329 1592699499 ECH