Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09766 ATGAGTTTCCGAAACCGAGAAACTTCTCCAAAGGATGCAGTTTGTGTCAACAAGGACAAACGTACTTCTATCAAAAGAAGATCTTCAGAGAATGTATTGGAAAAAGAGACTCAACTTATGCTGGCTCAAAGAGAATTGAACAAGATAAAAAAACAGCTGGAAAGCGCTGAGAATACAAAAAGCAAAGGGCTTTCGGAGCTTGATAAGGCCAATGTGACACTTCAAGAATTGACAAAGAAACTGATTAGTGTTAGAGAATCAAAACAATCTGCAATTGAAGAAAGCGAGGCTGTAAGGAATCAGGCCAAGGAACTCGAAAAGGCATTATCGCAAAAAGCGATAGGATACGAGGCTTGGAAACAAGAGCTAGAGCATGCAAGAAAAGAGTACACTACAACTGTTAAGGAACTTGATGCTTCCAAGCAAGAACTCAACAAGATCAGACAAGATTTTGATGCTGCGTTGGAGGCGAAGTTGGCTGCGTTTCAGACAGCAGGGGAAGCGCAGCGATCGGCCAAGTTAAACTCGGAGAAGATCAATGAACTCTCAAAGGAAATTGCAACAATGAAAGCATCAACTGAACAGTTCAAGCTAGCAACTGTGCAAGCACAAGAAGAACAGGTAAGGGTGATTGGAGAGAAAGAAGAAAAGTTAAACTCTTACAAAAAATCCAAGGAGGAAATCGAGAAGAAACTGATGGAAATAAAGAATGAGTATGATCCTGACGAAATGCAAAGTCTCGAGGCGAAACTCGTGGAGACGAGTGGTGAGATTCAAGTTCTTCAACAGAAAATTAAAGAGTTTCATGATTCTGAGATTGATTCTGTTGAGCTAATAACTTTGGAGATCAAAGAAGCCACAAAGACATTACAGGAAATTTCTGAAGAAGAAACTTCACTGAGAAGCCTAGTGGATTTCCTCAAGACAGAATTAGAACAAGTGGACAAAGAACAAGAGGAGCTTAAGGAGAAAGAACAAGCATCAGAAGCACTTGCCGTGAACCTAACCGGTTCACTACAAAGTAGCAAAGAAGAAGAAGAAGATTCTTTTGAGAGTAAAGAATCTAATGAGAGACACTGTCATGAGACAGAAATGAAAATCAAGCAGTTATCGTTCGAGAAGGAGAATGCAAGAAAAGAAGAAGAAGAGATGAGAATAAAAACTCATGAACTGACACAAGAGATTGAAAAATCCAAAGCTTTGTCTAAGGAGATAGAAGAGAAGCTAGAGCTTTTATTGAAACAGGCTGAAGAAGCAAAAGCAGAAGAGAAAAGAGCTGTTGAGGAAATGAAGTTGTTATCAGACTCACAAGGTAGAGTTTCGGTTTCGGATTTGAGTGGTAAGATCATATTGACAGTTGAGGAATTTGCTGCATTGAGCGGCAAGATTAAGGAATCAGAAGATTTGATTGAGAGGACGGAAGCAACTGCGATGGCTCAGGTTGAAGCGATCCACACGAGAAGAAATGAAGTTGAGAAAAAAGTCGAAGCTAATCTTATAGCAATTGAAGAAATAAAAGCAGCAACGGATTTGGCTTTGAGGAATGCAGAGATGGCGGATTCAGCAAAGTTTGCGGTTGAAGGCGAATTAAAGAGAAAGCGCAACGAAGAACAAAAAGGGATATCTGATTCTGATCATTCCAATAGTTCTTCGAGACCGATCTCGCAACACAGCTAG 1677 0.4013 MSFRNRETSPKDAVCVNKDKRTSIKRRSSENVLEKETQLMLAQRELNKIKKQLESAENTKSKGLSELDKANVTLQELTKKLISVRESKQSAIEESEAVRNQAKELEKALSQKAIGYEAWKQELEHARKEYTTTVKELDASKQELNKIRQDFDAALEAKLAAFQTAGEAQRSAKLNSEKINELSKEIATMKASTEQFKLATVQAQEEQVRVIGEKEEKLNSYKKSKEEIEKKLMEIKNEYDPDEMQSLEAKLVETSGEIQVLQQKIKEFHDSEIDSVELITLEIKEATKTLQEISEEETSLRSLVDFLKTELEQVDKEQEELKEKEQASEALAVNLTGSLQSSKEEEEDSFESKESNERHCHETEMKIKQLSFEKENARKEEEEMRIKTHELTQEIEKSKALSKEIEEKLELLLKQAEEAKAEEKRAVEEMKLLSDSQGRVSVSDLSGKIILTVEEFAALSGKIKESEDLIERTEATAMAQVEAIHTRRNEVEKKVEANLIAIEEIKAATDLALRNAEMADSAKFAVEGELKRKRNEEQKGISDSDHSNSSSRPISQHS 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09766 558 MobiDBLite consensus disorder prediction 524 543 - -
Vifa1g09766 558 MobiDBLite consensus disorder prediction 544 558 - -
Vifa1g09766 558 MobiDBLite consensus disorder prediction 341 363 - -
Vifa1g09766 558 Pfam Weak chloroplast movement under blue light 36 539 IPR008545 -
Vifa1g09766 558 MobiDBLite consensus disorder prediction 524 558 - -
Vifa1g09766 558 MobiDBLite consensus disorder prediction 1 21 - -
Vifa1g09766 558 Coils Coil 276 296 - -
Vifa1g09766 558 MobiDBLite consensus disorder prediction 317 363 - -
Vifa1g09766 558 Coils Coil 32 112 - -
Vifa1g09766 558 Coils Coil 211 238 - -
Vifa1g09766 558 Coils Coil 304 334 - -
Vifa1g09766 558 Coils Coil 360 436 - -
Vifa1g09766 558 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 9 543 - -
Vifa1g09766 558 Coils Coil 244 264 - -
Vifa1g09766 558 Coils Coil 116 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09766 Vifa-Chr1 1583303997 1583306065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09766 - - gmx:100818297 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09766 1 1583303997 1583306065 Vifa1g09766 1 1583303997 1583306065 ECH