Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09764 ATGGCAGATCTCAAGTCCACTTTCTTGAATGTTTACTCTGTTCTCAAATCTGAGCTTCTCAATGACGCTGCTTTCGAGTGGTCTCATGATTCTCGTCAATGGGTTGACAGGATGCTCGACTACACTGTGCCTGGAGGGAAGCTGAACCGAGGACTGTCTGTTATTGACAGCTACAGACTGTTAAAAGAAGGACATGCATTAAATGATGACGAAATTTTCCTTGCTAGTGCTCTTGGTTGGTGTATTGAATGGCTTCAGGCGTATTTTCTTGTTCTTGACGACATTATGGATAACTCCCATACACGTCGCGGTCAGCCATGTTGGTTTAGAGTACCCAAGGTCGGAATGATTGCAGCAAACGATGGAGTTCTACTAAGAAACCATATTCCGCGTATACTTAGGAAACACTTCAAGGGAAAGCCTTATTATGTCGATCTCCTTGATTTGTTCAACGAGGTCGAGTTTCAAACTGCTGCAGGACAGATGATAGATTTGATCACCACACTGGAAGGAGAAAAAGACCTGTCCAAATACACTTTATCACTGCACCGACGTATTGTACAATACAAGACTGCCTATTATTCATTTTACCTTCCTGTTGCATGTGCATTGCTCATGGCGGGCGAGAATCTGGATAACCATGTTGATGTAAAGAACATTCTTGTTGAGATGGGCACATATTTTCAAGTTCAGGATGATTATTTGGATTGCTACGGTGATCCTGAAACAATTGGAAAGATAGGCACAGATATTGAAGACTTTAAGTGCTCTTGGTTAGTCGTAAAAGCATTGGAACTTTCCAATGACGAACAAAAGAAAGTTTTACATGAGAACTATGGGAAGCCAGATCCAGCAAATGTTGCTAAAGTGAAGATCCTTTATAACGAGCTTAATCTCGAGGGTGTGTTCAAGGAGTATGAGCGTGCGAGCTATGAGAAGCTTGTAACCTCCATTGAAGCTCATTCCAGCAAAGCAGTTCAAGCCGTATTGAAGTCATTTTTGGCTAAAATTTACAAGAGACTGAAGTAG 1029 0.4179 MADLKSTFLNVYSVLKSELLNDAAFEWSHDSRQWVDRMLDYTVPGGKLNRGLSVIDSYRLLKEGHALNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILRKHFKGKPYYVDLLDLFNEVEFQTAAGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCYGDPETIGKIGTDIEDFKCSWLVVKALELSNDEQKKVLHENYGKPDPANVAKVKILYNELNLEGVFKEYERASYEKLVTSIEAHSSKAVQAVLKSFLAKIYKRLK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09764 342 ProSitePatterns Polyprenyl synthases signature 1. 90 104 IPR033749 -
Vifa1g09764 342 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 2 341 IPR039702 GO:0008299|GO:0016765
Vifa1g09764 342 SFLD Isoprenoid Synthase Type I 18 340 - -
Vifa1g09764 342 Pfam Polyprenyl synthetase 33 296 IPR000092 GO:0008299
Vifa1g09764 342 ProSitePatterns Polyprenyl synthases signature 2. 224 236 IPR033749 -
Vifa1g09764 342 SUPERFAMILY Terpenoid synthases 6 341 IPR008949 -
Vifa1g09764 342 Gene3D Farnesyl Diphosphate Synthase 2 341 IPR008949 -
Vifa1g09764 342 SFLD Polyprenyl Transferase Like 18 340 - -
Vifa1g09764 342 CDD Trans_IPPS_HT 30 265 IPR000092 GO:0008299
Vifa1g09764 342 FunFam Farnesyl pyrophosphate synthase 1 341 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09764 K00787 - gmx:100802347 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09764 1 1582657351 1582660409 Vifa1g09764 1 1582657351 1582660409 ECH